RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
RPE-203ENST00000408981 HTTP42858 3142 aa11.91□□□□□ -0.5
RPE-203ENST00000408981 RTL1A6NKG5 1358 aa11.91□□□□□ -0.5
RPE-203ENST00000408981 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.5
RPE-203ENST00000408981 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
RPE-203ENST00000408981 HIRAP54198 1017 aaPredicted RBP11.9□□□□□ -0.5
RPE-203ENST00000408981 COL15A1P39059 1388 aa11.9□□□□□ -0.5
RPE-203ENST00000408981 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
RPE-203ENST00000408981 LARGE2Q8N3Y3 721 aa11.89□□□□□ -0.51
RPE-203ENST00000408981 ST5P78524 1137 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 KRT26Q7Z3Y9 468 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 HDGFL2Q7Z4V5 671 aaPredicted RBP11.88□□□□□ -0.51
RPE-203ENST00000408981 CNBD1Q8NA66 436 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
RPE-203ENST00000408981 COL4A5P29400 1685 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 ERVV-2B6SEH9 535 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
RPE-203ENST00000408981 MYCP01106 439 aaPredicted RBP11.87□□□□□ -0.51
RPE-203ENST00000408981 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
RPE-203ENST00000408981 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
RPE-203ENST00000408981 TRPM4Q8TD43 1214 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 COG3Q96JB2 828 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 PSMD1Q99460 953 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
RPE-203ENST00000408981 STAP2Q9UGK3 403 aa11.87□□□□□ -0.51
RPE-203ENST00000408981 CENPFP49454 3210 aa11.86□□□□□ -0.51
RPE-203ENST00000408981 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
RPE-203ENST00000408981 NPR1P16066 1061 aa11.86□□□□□ -0.51
RPE-203ENST00000408981 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
RPE-203ENST00000408981 CABP4P57796 275 aa11.85□□□□□ -0.51
RPE-203ENST00000408981 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 ADM5C9JUS6 153 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 TM4SF4P48230 202 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 ALYREFQ86V81 257 aaKnown RBP11.84□□□□□ -0.51
RPE-203ENST00000408981 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 BCL2L13Q9BXK5 485 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 CFHR5Q9BXR6 569 aa11.84□□□□□ -0.51
RPE-203ENST00000408981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.511e-7■■□□□ 14.3
RPE-203ENST00000408981 TJP1Q07157 1748 aa11.83□□□□□ -0.52
RPE-203ENST00000408981 A0A1W2PP64 1363 aa11.83□□□□□ -0.52
RPE-203ENST00000408981 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
RPE-203ENST00000408981 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
RPE-203ENST00000408981 MRC1P22897 1456 aa11.83□□□□□ -0.52
RPE-203ENST00000408981 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 ANKRD26Q9UPS8 1709 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 IRS2Q9Y4H2 1338 aa11.82□□□□□ -0.52
RPE-203ENST00000408981 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
RPE-203ENST00000408981 CD99L2Q8TCZ2 262 aa11.81□□□□□ -0.52
RPE-203ENST00000408981 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
RPE-203ENST00000408981 GUCD1Q96NT3 240 aa11.81□□□□□ -0.52
RPE-203ENST00000408981 HCN4Q9Y3Q4 1203 aa11.81□□□□□ -0.52
RPE-203ENST00000408981 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
RPE-203ENST00000408981 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
RPE-203ENST00000408981 H7C1D1 291 aa11.8□□□□□ -0.52
RPE-203ENST00000408981 BCAMP50895 628 aa11.8□□□□□ -0.52
RPE-203ENST00000408981 CXCL9Q07325 125 aa11.8□□□□□ -0.52
RPE-203ENST00000408981 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
RPE-203ENST00000408981 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
RPE-203ENST00000408981 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
RPE-203ENST00000408981 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
RPE-203ENST00000408981 ZNF609O15014 1411 aa11.79□□□□□ -0.52
RPE-203ENST00000408981 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
RPE-203ENST00000408981 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
RPE-203ENST00000408981 CNOT7Q9UIV1 285 aaKnown RBP11.79□□□□□ -0.52
RPE-203ENST00000408981 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 ALDH1A1P00352 501 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
RPE-203ENST00000408981 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
RPE-203ENST00000408981 ALDH1B1P30837 517 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 MAFAQ8NHW3 353 aaPredicted RBP11.78□□□□□ -0.52
RPE-203ENST00000408981 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
RPE-203ENST00000408981 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
RPE-203ENST00000408981 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
RPE-203ENST00000408981 MUC3AQ02505 3323 aa11.77□□□□□ -0.52
RPE-203ENST00000408981 A0A087WZG4 1122 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 EVI5O60447 810 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 TJAP1Q5JTD0 557 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
RPE-203ENST00000408981 BMP8BP34820 402 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 FKBP1BP68106 108 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 MICALL2Q8IY33 904 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 SLC12A5Q9H2X9 1139 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 PTCH2Q9Y6C5 1203 aa11.76□□□□□ -0.53
RPE-203ENST00000408981 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms