RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 PDE11AQ9HCR9 933 aa10.49□□□□□ -0.73
PSEN1-205ENST00000406768 HOOK1Q9UJC3 728 aaKnown RBP10.49□□□□□ -0.73
PSEN1-205ENST00000406768 ODF2LQ9ULJ1 636 aa10.49□□□□□ -0.73
PSEN1-205ENST00000406768 PPP1R12AO14974 1030 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 MMP14P50281 582 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 BRD3Q15059 726 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 B4GALNT4Q76KP1 1039 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CCDC148Q8NFR7 591 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 FAM76AQ8TAV0 307 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 ADGRL2O95490 1459 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CAMSAP2Q08AD1 1489 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 WDR7Q9Y4E6 1490 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 HSPA4P34932 840 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 PEX19P40855 299 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 PPFIBP1Q86W92 1011 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 C16orf71Q8IYS4 520 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 TRIM6Q9C030 488 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 SETSIPP0DME0 302 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 ERCC3P19447 782 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 ANKRD1Q15327 319 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CTCFLQ8NI51 663 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 KIF2CQ99661 725 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 ORC3Q9UBD5 711 aaPredicted RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 PUF60Q9UHX1 559 aaKnown RBP10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CTAGE15A4D2H0 777 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CTAGE8P0CG41 777 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 STK3Q13188 491 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 SYNE3Q6ZMZ3 975 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CTAGE6Q86UF2 777 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CTAGE4Q8IX94 777 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 NUP133Q8WUM0 1156 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 CABS1Q96KC9 395 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 MPHOSPH8Q99549 860 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 MED4Q9NPJ6 270 aa10.48□□□□□ -0.73
PSEN1-205ENST00000406768 GOLGA6L10A6NI86 522 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 RHOXF2BP0C7M4 288 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 STK38Q15208 465 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 CNNM3Q8NE01 707 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 RHOXF2Q9BQY4 288 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 NLRP1Q9C000 1473 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 MAST1Q9Y2H9 1570 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 PIK3C2GO75747 1445 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 ZKSCAN8Q15776 578 aaPredicted RBP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 CEP85LQ5SZL2 805 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 NDUFAB1O14561 156 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 PPFIA4O75335 1185 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 NAP1L1P55209 391 aaKnown RBP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 LONRF2Q1L5Z9 754 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
PSEN1-205ENST00000406768 UTP14AQ9BVJ6 771 aaKnown RBP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 NUCKS1Q9H1E3 243 aaKnown RBP10.47□□□□□ -0.73
PSEN1-205ENST00000406768 CHMP4BP1P59074 171 aa10.46□□□□□ -0.73
PSEN1-205ENST00000406768 MRFAP1L1Q96HT8 127 aa10.46□□□□□ -0.73
PSEN1-205ENST00000406768 CALR3Q96L12 384 aaKnown RBP10.46□□□□□ -0.73
PSEN1-205ENST00000406768 ABCC11Q96J66 1382 aa10.46□□□□□ -0.73
PSEN1-205ENST00000406768 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.73
PSEN1-205ENST00000406768 EPB41L2O43491 1005 aaKnown RBP10.46□□□□□ -0.74
PSEN1-205ENST00000406768 ARHGAP25P42331 645 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 IFNKQ9P0W0 207 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 FAN1Q9Y2M0 1017 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 KIF3CO14782 793 aa10.46□□□□□ -0.74
PSEN1-205ENST00000406768 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.74
PSEN1-205ENST00000406768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.46□□□□□ -0.74
PSEN1-205ENST00000406768 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 FAM71BQ8TC56 605 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 RABEP2Q9H5N1 569 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 CCT5P48643 541 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 TACO1Q9BSH4 297 aaKnown RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 PLEKHA4Q9H4M7 779 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 GNL3LQ9NVN8 582 aaKnown RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 TERF2IPQ9NYB0 399 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 FRMD3A2A2Y4 597 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 CLSTN1O94985 981 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 IRX1P78414 480 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 CCAR1Q8IX12 1150 aaKnown RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 TDRD7Q8NHU6 1098 aaKnown RBP10.45□□□□□ -0.74
PSEN1-205ENST00000406768 TESK2Q96S53 571 aa10.45□□□□□ -0.74
PSEN1-205ENST00000406768 PLA2G4AP47712 749 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 BLOC1S2Q6QNY1 142 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 CCDC121Q6ZUS5 278 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 CCDC50Q8IVM0 306 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 RABGGTAQ92696 567 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 CLSTN2Q9H4D0 955 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 EXOC6BQ9Y2D4 811 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 PLCH2O75038 1416 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 PSEN1P49768 467 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 UBASH3AP57075 661 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 FILIP1LQ4L180 1135 aa10.44□□□□□ -0.74
PSEN1-205ENST00000406768 FSIP1Q8NA03 581 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms