RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 C3orf67Q6ZVT6 689 aa21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 C7orf43Q8WVR3 580 aa21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 UTP14AQ9BVJ6 771 aaKnown RBP21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 HYPKQ9NX55 129 aa21.76■■□□□ 1.07
CSNK1D-205ENST00000403276 CRY2Q49AN0 593 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 HSP90AB3PQ58FF7 597 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 NLRP10Q86W26 655 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 SYNE4Q8N205 404 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 PLBD2Q8NHP8 589 aa21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
CSNK1D-205ENST00000403276 ALDH1B1P30837 517 aa21.74■■□□□ 1.07
CSNK1D-205ENST00000403276 LAMB2P55268 1798 aa21.74■■□□□ 1.07
CSNK1D-205ENST00000403276 RPGRQ92834 1020 aaKnown RBP21.73■■□□□ 1.07
CSNK1D-205ENST00000403276 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
CSNK1D-205ENST00000403276 ATP5J2-PTCD1G3V325 749 aa21.72■■□□□ 1.07
CSNK1D-205ENST00000403276 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
CSNK1D-205ENST00000403276 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
CSNK1D-205ENST00000403276 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
CSNK1D-205ENST00000403276 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 CCDC93Q567U6 631 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 NLRP3Q96P20 1036 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 RRAGCQ9HB90 399 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 TRMT112Q9UI30 125 aaKnown RBP21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 TAF1P21675 1872 aa21.71■■□□□ 1.07
CSNK1D-205ENST00000403276 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
CSNK1D-205ENST00000403276 HOXA10P31260 410 aaPredicted RBP21.7■■□□□ 1.06
CSNK1D-205ENST00000403276 SLC51AQ86UW1 340 aa21.7■■□□□ 1.06
CSNK1D-205ENST00000403276 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
CSNK1D-205ENST00000403276 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
CSNK1D-205ENST00000403276 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
CSNK1D-205ENST00000403276 RIC3Q7Z5B4 369 aa21.69■■□□□ 1.06
CSNK1D-205ENST00000403276 ISCA1Q9BUE6 129 aa21.69■■□□□ 1.06
CSNK1D-205ENST00000403276 IL16Q14005 1332 aa21.69■■□□□ 1.06
CSNK1D-205ENST00000403276 ZC3H4Q9UPT8 1303 aaKnown RBP21.68■■□□□ 1.06
CSNK1D-205ENST00000403276 DDX60Q8IY21 1712 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 GLTPD2A6NH11 291 aa21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 CRAMP1Q96RY5 1269 aa21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 ZNF277Q9NRM2 450 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-205ENST00000403276 RNF123Q5XPI4 1314 aa21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.065e-7■□□□□ 8.6
CSNK1D-205ENST00000403276 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 WDR63Q8IWG1 891 aa21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 FAM89AQ96GI7 184 aa21.66■■□□□ 1.06
CSNK1D-205ENST00000403276 FANCIQ9NVI1 1328 aa21.65■■□□□ 1.06
CSNK1D-205ENST00000403276 TOMM70O94826 608 aa21.65■■□□□ 1.06
CSNK1D-205ENST00000403276 MYD88Q99836 296 aa21.65■■□□□ 1.06
CSNK1D-205ENST00000403276 SPINK5Q9NQ38 1064 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-205ENST00000403276 PPEF1O14829 653 aaPredicted RBP21.64■■□□□ 1.05
CSNK1D-205ENST00000403276 ABCC4O15439 1325 aa21.63■■□□□ 1.05
CSNK1D-205ENST00000403276 DPY19L2Q6NUT2 758 aa21.63■■□□□ 1.05
CSNK1D-205ENST00000403276 C16orf71Q8IYS4 520 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-205ENST00000403276 CHMP4AQ9BY43 222 aa21.63■■□□□ 1.05
CSNK1D-205ENST00000403276 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
CSNK1D-205ENST00000403276 TRIM28Q13263 835 aaKnown RBP21.62■■□□□ 1.05
CSNK1D-205ENST00000403276 G2E3Q7L622 706 aa21.62■■□□□ 1.05
CSNK1D-205ENST00000403276 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
CSNK1D-205ENST00000403276 CACNA1FO60840 1977 aa21.61■■□□□ 1.05
CSNK1D-205ENST00000403276 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
CSNK1D-205ENST00000403276 EXOSC9Q06265 439 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-205ENST00000403276 POTECB2RU33 542 aa21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 DDNO94850 711 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 DDX58O95786 925 aaKnown RBP21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 IARSP41252 1262 aaKnown RBP21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 CC2D2BQ6DHV5 1058 aa21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 MAP3K2Q9Y2U5 619 aa21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
CSNK1D-205ENST00000403276 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 VAMP4O75379 141 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 VEGFAP15692 232 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 HSPA6P17066 643 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 DDX46Q7L014 1031 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 PSMD1Q99460 953 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 ATP6V0A2Q9Y487 856 aa21.59■■□□□ 1.05
CSNK1D-205ENST00000403276 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-205ENST00000403276 KSR2Q6VAB6 950 aa21.58■■□□□ 1.05
CSNK1D-205ENST00000403276 RBM46Q8TBY0 533 aaKnown RBP21.58■■□□□ 1.05
CSNK1D-205ENST00000403276 BBOX1O75936 387 aa21.57■■□□□ 1.04
CSNK1D-205ENST00000403276 GRAPQ13588 217 aa21.57■■□□□ 1.04
CSNK1D-205ENST00000403276 ZBTB38Q8NAP3 1195 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-205ENST00000403276 GRAPLQ8TC17 118 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-205ENST00000403276 ZNF541Q9H0D2 1346 aa21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 SF3B3Q15393 1217 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 CCDC191Q8NCU4 936 aa21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 TMX4Q9H1E5 349 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 CWC25Q9NXE8 425 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 COL4A1P02462 1669 aa21.56■■□□□ 1.04
CSNK1D-205ENST00000403276 COL4A5P29400 1685 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms