RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
SNU13-204ENST00000402458 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
SNU13-204ENST00000402458 BEND3Q5T5X7 828 aa17.24■□□□□ 0.35
SNU13-204ENST00000402458 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
SNU13-204ENST00000402458 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
SNU13-204ENST00000402458 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
SNU13-204ENST00000402458 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
SNU13-204ENST00000402458 IGKV5-2P06315 115 aa17.23■□□□□ 0.35
SNU13-204ENST00000402458 TRIM27P14373 513 aa17.23■□□□□ 0.35
SNU13-204ENST00000402458 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
SNU13-204ENST00000402458 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
SNU13-204ENST00000402458 NRXN2Q9P2S2 1712 aa17.22■□□□□ 0.35
SNU13-204ENST00000402458 NTSR2O95665 410 aa17.22■□□□□ 0.35
SNU13-204ENST00000402458 HSP90B1P14625 803 aaKnown RBP17.22■□□□□ 0.35
SNU13-204ENST00000402458 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
SNU13-204ENST00000402458 LRP5O75197 1615 aa17.21■□□□□ 0.35
SNU13-204ENST00000402458 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
SNU13-204ENST00000402458 GCKRQ14397 625 aa17.21■□□□□ 0.35
SNU13-204ENST00000402458 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
SNU13-204ENST00000402458 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
SNU13-204ENST00000402458 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
SNU13-204ENST00000402458 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
SNU13-204ENST00000402458 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
SNU13-204ENST00000402458 ABCC4O15439 1325 aa17.21■□□□□ 0.34
SNU13-204ENST00000402458 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
SNU13-204ENST00000402458 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
SNU13-204ENST00000402458 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
SNU13-204ENST00000402458 ERFEQ4G0M1 354 aa17.19■□□□□ 0.34
SNU13-204ENST00000402458 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
SNU13-204ENST00000402458 FAM89AQ96GI7 184 aa17.19■□□□□ 0.34
SNU13-204ENST00000402458 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
SNU13-204ENST00000402458 GRM8O00222 908 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 PLIN1O60240 522 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 PDE6BP35913 854 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
SNU13-204ENST00000402458 PDZRN3Q9UPQ7 1066 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
SNU13-204ENST00000402458 IRS4O14654 1257 aaPredicted RBP17.17■□□□□ 0.34
SNU13-204ENST00000402458 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
SNU13-204ENST00000402458 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
SNU13-204ENST00000402458 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
SNU13-204ENST00000402458 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
SNU13-204ENST00000402458 TNNQ9UQP3 1299 aa17.17■□□□□ 0.34
SNU13-204ENST00000402458 H7C1W4 665 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 SLC10A5Q5PT55 438 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 KIF13BQ9NQT8 1826 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
SNU13-204ENST00000402458 RIC1Q4ADV7 1423 aa17.15■□□□□ 0.34
SNU13-204ENST00000402458 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
SNU13-204ENST00000402458 TGFB2P61812 414 aa17.15■□□□□ 0.34
SNU13-204ENST00000402458 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
SNU13-204ENST00000402458 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
SNU13-204ENST00000402458 FHDC1Q9C0D6 1143 aaPredicted RBP17.15■□□□□ 0.34
SNU13-204ENST00000402458 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
SNU13-204ENST00000402458 H0YIN7 160 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 PDE8AO60658 829 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 GNAI3P08754 354 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
SNU13-204ENST00000402458 LAMB2P55268 1798 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
SNU13-204ENST00000402458 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
SNU13-204ENST00000402458 RLBP1P12271 317 aa17.13■□□□□ 0.33
SNU13-204ENST00000402458 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
SNU13-204ENST00000402458 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
SNU13-204ENST00000402458 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
SNU13-204ENST00000402458 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
SNU13-204ENST00000402458 MYH3P11055 1940 aa17.12■□□□□ 0.33
SNU13-204ENST00000402458 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
SNU13-204ENST00000402458 UTYO14607 1347 aa17.12■□□□□ 0.33
SNU13-204ENST00000402458 NBPF7P0C2Y1 421 aaPredicted RBP17.11■□□□□ 0.33
SNU13-204ENST00000402458 CASP7P55210 303 aa17.11■□□□□ 0.33
SNU13-204ENST00000402458 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
SNU13-204ENST00000402458 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
SNU13-204ENST00000402458 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
SNU13-204ENST00000402458 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
SNU13-204ENST00000402458 NPR1P16066 1061 aa17.1■□□□□ 0.33
SNU13-204ENST00000402458 CTSWP56202 376 aa17.1■□□□□ 0.33
SNU13-204ENST00000402458 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
SNU13-204ENST00000402458 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNU13-204ENST00000402458 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
SNU13-204ENST00000402458 RBM17Q96I25 401 aaKnown RBP17.1■□□□□ 0.33
SNU13-204ENST00000402458 PLA2G12BQ9BX93 195 aa17.1■□□□□ 0.33
SNU13-204ENST00000402458 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SNU13-204ENST00000402458 A0A0G2JLW4 131 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
SNU13-204ENST00000402458 SRGNP10124 158 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 DPEP1P16444 411 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
SNU13-204ENST00000402458 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 STYK1Q6J9G0 422 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
SNU13-204ENST00000402458 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SNU13-204ENST00000402458 CHRNA5P30532 468 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms