RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 LARGE1O95461 756 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 PYCARDQ9ULZ3 195 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
ATG3-202ENST00000402314 ZNF790Q6PG37 636 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
ATG3-202ENST00000402314 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
ATG3-202ENST00000402314 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
ATG3-202ENST00000402314 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
ATG3-202ENST00000402314 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 PIBF1Q8WXW3 757 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 BOLA2Q9H3K6 86 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
ATG3-202ENST00000402314 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
ATG3-202ENST00000402314 MCM2P49736 904 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
ATG3-202ENST00000402314 RUFY3Q7L099 469 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 PDCL2Q8N4E4 241 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 SYAP1Q96A49 352 aaPredicted RBP16.86■□□□□ 0.29
ATG3-202ENST00000402314 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 MYD88Q99836 296 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 RIOK3O14730 519 aaKnown RBP16.86■□□□□ 0.29
ATG3-202ENST00000402314 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
ATG3-202ENST00000402314 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG3-202ENST00000402314 ALDH1L1O75891 902 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 CHGBP05060 677 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 ZBTB22O15209 634 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
ATG3-202ENST00000402314 MTX1Q13505 466 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 KDM3BQ7LBC6 1761 aa16.85■□□□□ 0.29
ATG3-202ENST00000402314 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
ATG3-202ENST00000402314 AP5Z1O43299 807 aa16.84■□□□□ 0.29
ATG3-202ENST00000402314 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
ATG3-202ENST00000402314 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
ATG3-202ENST00000402314 HEG1Q9ULI3 1381 aa16.84■□□□□ 0.29
ATG3-202ENST00000402314 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.29
ATG3-202ENST00000402314 TTC14Q96N46 770 aa16.83■□□□□ 0.29
ATG3-202ENST00000402314 TCHHQ07283 1943 aa16.83■□□□□ 0.29
ATG3-202ENST00000402314 NPHP3Q7Z494 1330 aa16.83■□□□□ 0.29
ATG3-202ENST00000402314 CCDC83Q8IWF9 413 aa16.83■□□□□ 0.28
ATG3-202ENST00000402314 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
ATG3-202ENST00000402314 SLC52A2Q9HAB3 445 aa16.83■□□□□ 0.28
ATG3-202ENST00000402314 PHKG2P15735 406 aa16.82■□□□□ 0.28
ATG3-202ENST00000402314 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
ATG3-202ENST00000402314 C19orf44Q9H6X5 657 aa16.82■□□□□ 0.28
ATG3-202ENST00000402314 NMIQ13287 307 aaPredicted RBP16.82■□□□□ 0.28
ATG3-202ENST00000402314 CAMK4Q16566 473 aa16.82■□□□□ 0.28
ATG3-202ENST00000402314 TTC41PQ6P2S7 1318 aa16.82■□□□□ 0.28
ATG3-202ENST00000402314 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
ATG3-202ENST00000402314 CYP27B1O15528 508 aa16.81■□□□□ 0.28
ATG3-202ENST00000402314 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
ATG3-202ENST00000402314 KCNJ4P48050 445 aa16.81■□□□□ 0.28
ATG3-202ENST00000402314 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
ATG3-202ENST00000402314 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
ATG3-202ENST00000402314 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
ATG3-202ENST00000402314 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
ATG3-202ENST00000402314 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
ATG3-202ENST00000402314 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 KCNF1Q9H3M0 494 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 RPAP1Q9BWH6 1393 aaPredicted RBP16.8■□□□□ 0.28
ATG3-202ENST00000402314 ATF3P18847 181 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 ZNF771Q7L3S4 317 aaPredicted RBP16.8■□□□□ 0.28
ATG3-202ENST00000402314 C16orf45Q96MC5 204 aaPredicted RBP16.8■□□□□ 0.28
ATG3-202ENST00000402314 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
ATG3-202ENST00000402314 PHF14O94880 888 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 SYT1P21579 422 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 GCKRQ14397 625 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
ATG3-202ENST00000402314 ZNF592Q92610 1267 aa16.79■□□□□ 0.28
ATG3-202ENST00000402314 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
ATG3-202ENST00000402314 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
ATG3-202ENST00000402314 MEGF6O75095 1541 aa16.79■□□□□ 0.28
ATG3-202ENST00000402314 LRMPQ12912 555 aa16.79■□□□□ 0.28
ATG3-202ENST00000402314 BBXQ8WY36 941 aaPredicted RBP16.79■□□□□ 0.28
ATG3-202ENST00000402314 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
ATG3-202ENST00000402314 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
ATG3-202ENST00000402314 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
ATG3-202ENST00000402314 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 SLIT3O75094 1523 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 KDM4AO75164 1064 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 PTGS1P23219 599 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 CHAF1AQ13111 956 aaPredicted RBP16.78■□□□□ 0.28
ATG3-202ENST00000402314 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
ATG3-202ENST00000402314 ZNF589Q86UQ0 364 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms