RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 TFCP2Q12800 502 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 LRSAM1Q6UWE0 723 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 CLEC17AQ6ZS10 378 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
SCFD2-202ENST00000401642 CABP4P57796 275 aa13.29□□□□□ -0.28
SCFD2-202ENST00000401642 GIMAP6Q6P9H5 292 aa13.29□□□□□ -0.28
SCFD2-202ENST00000401642 ZNF589Q86UQ0 364 aaPredicted RBP13.29□□□□□ -0.28
SCFD2-202ENST00000401642 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
SCFD2-202ENST00000401642 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
SCFD2-202ENST00000401642 CEBPZQ03701 1054 aaKnown RBP13.29□□□□□ -0.28
SCFD2-202ENST00000401642 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
SCFD2-202ENST00000401642 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 PDIA6Q15084 440 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 CAMK4Q16566 473 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 ME3Q16798 604 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 ERBB3P21860 1342 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 NEURL1BA8MQ27 555 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 ZSCAN22P10073 491 aaPredicted RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 LARP1Q6PKG0 1096 aaKnown RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 MBD3O95983 291 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
SCFD2-202ENST00000401642 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 USP25Q9UHP3 1055 aa13.28□□□□□ -0.28
SCFD2-202ENST00000401642 GCKRQ14397 625 aa13.27□□□□□ -0.28
SCFD2-202ENST00000401642 ZSCAN30Q86W11 494 aa13.27□□□□□ -0.28
SCFD2-202ENST00000401642 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.28
SCFD2-202ENST00000401642 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.27□□□□□ -0.28
SCFD2-202ENST00000401642 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.29
SCFD2-202ENST00000401642 HOXB7P09629 217 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 TIMM10P62072 90 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 LARP1BQ659C4 914 aaKnown RBP13.27□□□□□ -0.29
SCFD2-202ENST00000401642 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 INTS4Q96HW7 963 aaKnown RBP13.27□□□□□ -0.29
SCFD2-202ENST00000401642 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
SCFD2-202ENST00000401642 CYP27B1O15528 508 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 A1BGP04217 495 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 PHKG2P15735 406 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 TTC14Q96N46 770 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 TTC41PQ6P2S7 1318 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 KDM4AO75164 1064 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 SNRKQ9NRH2 765 aa13.26□□□□□ -0.29
SCFD2-202ENST00000401642 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 DNTTIP2Q5QJE6 756 aaKnown RBP13.25□□□□□ -0.29
SCFD2-202ENST00000401642 BLOC1S2Q6QNY1 142 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
SCFD2-202ENST00000401642 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 AOX1Q06278 1338 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 SLC27A2O14975 620 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 F13A1P00488 732 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 TTLL7Q6ZT98 887 aa13.25□□□□□ -0.29
SCFD2-202ENST00000401642 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
SCFD2-202ENST00000401642 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
SCFD2-202ENST00000401642 RPAP1Q9BWH6 1393 aaPredicted RBP13.25□□□□□ -0.29
SCFD2-202ENST00000401642 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 GOLIM4O00461 696 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 CDC37L1Q7L3B6 337 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 PPP1R9BQ96SB3 815 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 JAK2O60674 1132 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
SCFD2-202ENST00000401642 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
SCFD2-202ENST00000401642 CKAP2LQ8IYA6 745 aa13.23□□□□□ -0.29
SCFD2-202ENST00000401642 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
SCFD2-202ENST00000401642 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
SCFD2-202ENST00000401642 LTN1O94822 1766 aa13.23□□□□□ -0.29
SCFD2-202ENST00000401642 XRN1Q8IZH2 1706 aaKnown RBP13.23□□□□□ -0.29
SCFD2-202ENST00000401642 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
SCFD2-202ENST00000401642 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
SCFD2-202ENST00000401642 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCFD2-202ENST00000401642 ST3GAL1Q11201 340 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 MTMR6Q9Y217 621 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
SCFD2-202ENST00000401642 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
SCFD2-202ENST00000401642 MTX1Q13505 466 aa13.22□□□□□ -0.29
SCFD2-202ENST00000401642 TTC12Q9H892 705 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms