RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 LETM1O95202 739 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 SSR1P43307 286 aaKnown RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 ZNF662Q6ZS27 426 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 TFCP2L1Q9NZI6 479 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 CCNL1Q9UK58 526 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
CLIP4-202ENST00000401605 LTN1O94822 1766 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 RGPD5Q99666 1765 aa7.63□□□□□ -1.19
CLIP4-202ENST00000401605 FCHSD2O94868 740 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 OSBPP22059 807 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-202ENST00000401605 SGSM3Q96HU1 749 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 SYT17Q9BSW7 474 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-202ENST00000401605 TSPYL2Q9H2G4 693 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-202ENST00000401605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLIP4-202ENST00000401605 POLKQ9UBT6 870 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 CYP27B1O15528 508 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 NRDCO43847 1150 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 YY1P25490 414 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 KCNQ4P56696 695 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 SPTY2D1Q68D10 685 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-202ENST00000401605 SPG7Q9UQ90 795 aa7.62□□□□□ -1.19
CLIP4-202ENST00000401605 FAM208AQ9UK61 1670 aaKnown RBP7.61□□□□□ -1.19
CLIP4-202ENST00000401605 SBF2Q86WG5 1849 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 POLD1P28340 1107 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 EYA1Q99502 592 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 PANK3Q9H999 370 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 PNPLA7Q6ZV29 1317 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 MPRIPQ6WCQ1 1025 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 GIPC2Q8TF65 315 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
CLIP4-202ENST00000401605 BCL2L13Q9BXK5 485 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
CLIP4-202ENST00000401605 RAI14Q9P0K7 980 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 NCAPD2Q15021 1401 aa7.61□□□□□ -1.19
CLIP4-202ENST00000401605 MAP3K5Q99683 1374 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 POTEHQ6S545 545 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 NGEFQ8N5V2 710 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 PPP1R12CQ9BZL4 782 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 PALLDQ8WX93 1383 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 MAP2K1Q02750 393 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 EIF4A2Q14240 407 aaKnown RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 FOXD4L6Q3SYB3 417 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 FOXD4L3Q6VB84 417 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 NBPF5PQ86XG9 351 aaPredicted RBP7.6□□□□□ -1.19
CLIP4-202ENST00000401605 GPCPD1Q9NPB8 672 aa7.6□□□□□ -1.19
CLIP4-202ENST00000401605 CASZ1Q86V15 1759 aa7.59□□□□□ -1.19
CLIP4-202ENST00000401605 PAPPAQ13219 1627 aa7.59□□□□□ -1.19
CLIP4-202ENST00000401605 ZC3H4Q9UPT8 1303 aaKnown RBP7.59□□□□□ -1.19
CLIP4-202ENST00000401605 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
CLIP4-202ENST00000401605 CCDC96Q2M329 555 aa7.59□□□□□ -1.19
CLIP4-202ENST00000401605 NOL8Q76FK4 1167 aaKnown RBP7.59□□□□□ -1.19
CLIP4-202ENST00000401605 KNSTRNQ9Y448 316 aa7.59□□□□□ -1.19
CLIP4-202ENST00000401605 GOLIM4O00461 696 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 ZNF500O60304 480 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-202ENST00000401605 DSG3P32926 999 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 NBPF10Q6P3W6 841 aaKnown RBP7.58□□□□□ -1.2
CLIP4-202ENST00000401605 IFNL2Q8IZJ0 200 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 PIGBQ92521 554 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 UBXN4Q92575 508 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 RRAGDQ9NQL2 400 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-202ENST00000401605 BSDC1Q9NW68 430 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-202ENST00000401605 RIPOR2Q9Y4F9 1068 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 MARCH6O60337 910 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 PHKG2P15735 406 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 SATB1Q01826 763 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
CLIP4-202ENST00000401605 MORC1Q86VD1 984 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 NLRP7Q8WX94 980 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 TMOD3Q9NYL9 352 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 IGSF1Q8N6C5 1336 aa7.58□□□□□ -1.2
CLIP4-202ENST00000401605 LMOD1P29536 600 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-202ENST00000401605 COL23A1Q86Y22 540 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-202ENST00000401605 MYOM1P52179 1685 aa7.57□□□□□ -1.2
CLIP4-202ENST00000401605 BTAF1O14981 1849 aa7.57□□□□□ -1.2
CLIP4-202ENST00000401605 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-202ENST00000401605 PTGDRQ13258 359 aa7.57□□□□□ -1.2
CLIP4-202ENST00000401605 MPNDQ8N594 471 aa7.57□□□□□ -1.2
CLIP4-202ENST00000401605 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 SIK1P57059 783 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 HDAC1Q13547 482 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 DSG2Q14126 1118 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 PLEKHO1Q53GL0 409 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 NAALADL2Q58DX5 795 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 PRR29P0C7W0 189 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 SETDB1Q15047 1291 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 ZKSCAN8Q15776 578 aaPredicted RBP7.56□□□□□ -1.2
CLIP4-202ENST00000401605 GPR162Q16538 588 aa7.56□□□□□ -1.2
CLIP4-202ENST00000401605 ARMCX6Q7L4S7 300 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms