RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 NEXNQ0ZGT2 675 aa38.32■■■■□ 3.73
PKDCC-202ENST00000401498 ERFEQ4G0M1 354 aa38.32■■■■□ 3.73
PKDCC-202ENST00000401498 BRIP1Q9BX63 1249 aa38.32■■■■□ 3.73
PKDCC-202ENST00000401498 TGFB2P61812 414 aa38.31■■■■□ 3.72
PKDCC-202ENST00000401498 NOB1Q9ULX3 412 aaKnown RBP38.31■■■■□ 3.72
PKDCC-202ENST00000401498 CCDC191Q8NCU4 936 aa38.31■■■■□ 3.72
PKDCC-202ENST00000401498 TRMT112Q9UI30 125 aaKnown RBP38.31■■■■□ 3.72
PKDCC-202ENST00000401498 PXDNLA1KZ92 1463 aa38.3■■■■□ 3.72
PKDCC-202ENST00000401498 CWF19L2Q2TBE0 894 aaKnown RBP38.3■■■■□ 3.72
PKDCC-202ENST00000401498 ABCC12Q96J65 1359 aa38.3■■■■□ 3.72
PKDCC-202ENST00000401498 SYNE4Q8N205 404 aa38.28■■■■□ 3.72
PKDCC-202ENST00000401498 GOLGB1Q14789 3259 aaKnown RBP38.28■■■■□ 3.72
PKDCC-202ENST00000401498 A0A0G2JLW4 131 aa38.27■■■■□ 3.72
PKDCC-202ENST00000401498 NEURL1BA8MQ27 555 aa38.27■■■■□ 3.72
PKDCC-202ENST00000401498 CWC25Q9NXE8 425 aaPredicted RBP38.27■■■■□ 3.72
PKDCC-202ENST00000401498 RNF123Q5XPI4 1314 aa38.27■■■■□ 3.72
PKDCC-202ENST00000401498 BEND3Q5T5X7 828 aa38.27■■■■□ 3.72
PKDCC-202ENST00000401498 LINS1Q8NG48 757 aa38.27■■■■□ 3.72
PKDCC-202ENST00000401498 DPEP1P16444 411 aa38.26■■■■□ 3.72
PKDCC-202ENST00000401498 KIF16BQ96L93 1317 aa38.26■■■■□ 3.71
PKDCC-202ENST00000401498 CHRNA5P30532 468 aa38.25■■■■□ 3.71
PKDCC-202ENST00000401498 PDE6BP35913 854 aa38.25■■■■□ 3.71
PKDCC-202ENST00000401498 SLC4A10Q6U841 1118 aa38.25■■■■□ 3.71
PKDCC-202ENST00000401498 FAM89AQ96GI7 184 aa38.25■■■■□ 3.71
PKDCC-202ENST00000401498 TNRC6CQ9HCJ0 1690 aaKnown RBP38.25■■■■□ 3.71
PKDCC-202ENST00000401498 SH3TC1Q8TE82 1336 aa38.25■■■■□ 3.71
PKDCC-202ENST00000401498 KCNA3P22001 575 aa38.24■■■■□ 3.71
PKDCC-202ENST00000401498 SLC10A5Q5PT55 438 aa38.23■■■■□ 3.71
PKDCC-202ENST00000401498 ZBTB38Q8NAP3 1195 aaPredicted RBP38.23■■■■□ 3.71
PKDCC-202ENST00000401498 COL11A2P13942 1736 aaPredicted RBP38.22■■■■□ 3.71
PKDCC-202ENST00000401498 RIC1Q4ADV7 1423 aa38.22■■■■□ 3.71
PKDCC-202ENST00000401498 RTL5Q5HYW3 569 aaPredicted RBP38.22■■■■□ 3.71
PKDCC-202ENST00000401498 ARHGAP45Q92619 1136 aa38.22■■■■□ 3.71
PKDCC-202ENST00000401498 KLRG2A4D1S0 409 aaPredicted RBP38.21■■■■□ 3.71
PKDCC-202ENST00000401498 C2CD5Q86YS7 1000 aa38.21■■■■□ 3.71
PKDCC-202ENST00000401498 BRCA1P38398 1863 aaKnown RBP38.21■■■■□ 3.71
PKDCC-202ENST00000401498 DLEC1Q9Y238 1755 aa38.2■■■■□ 3.71
PKDCC-202ENST00000401498 GCKRQ14397 625 aa38.2■■■■□ 3.71
PKDCC-202ENST00000401498 DDX60Q8IY21 1712 aaKnown RBP38.2■■■■□ 3.71
PKDCC-202ENST00000401498 PCCAP05165 728 aaPredicted RBP38.19■■■■□ 3.7
PKDCC-202ENST00000401498 JARID2Q92833 1246 aaPredicted RBP38.19■■■■□ 3.7
PKDCC-202ENST00000401498 FRAT1Q92837 279 aaPredicted RBP38.19■■■■□ 3.7
PKDCC-202ENST00000401498 API5Q9BZZ5 524 aaKnown RBP38.19■■■■□ 3.7
PKDCC-202ENST00000401498 H0YIN7 160 aa38.19■■■■□ 3.7
PKDCC-202ENST00000401498 HCLS1P14317 486 aaPredicted RBP38.19■■■■□ 3.7
PKDCC-202ENST00000401498 SRCIN1Q9C0H9 1055 aa38.18■■■■□ 3.7
PKDCC-202ENST00000401498 RCAN3Q9UKA8 241 aa38.18■■■■□ 3.7
PKDCC-202ENST00000401498 C3orf67Q6ZVT6 689 aa38.17■■■■□ 3.7
PKDCC-202ENST00000401498 WWC3Q9ULE0 1092 aa38.17■■■■□ 3.7
PKDCC-202ENST00000401498 PDZRN3Q9UPQ7 1066 aa38.17■■■■□ 3.7
PKDCC-202ENST00000401498 IPO8O15397 1037 aaKnown RBP38.16■■■■□ 3.7
PKDCC-202ENST00000401498 SRGNP10124 158 aa38.16■■■■□ 3.7
PKDCC-202ENST00000401498 LAMB2P55268 1798 aa38.16■■■■□ 3.7
PKDCC-202ENST00000401498 ALDH1L1O75891 902 aa38.15■■■■□ 3.7
PKDCC-202ENST00000401498 H7C1W4 665 aa38.14■■■■□ 3.7
PKDCC-202ENST00000401498 IRS4O14654 1257 aaPredicted RBP38.14■■■■□ 3.7
PKDCC-202ENST00000401498 TRIM27P14373 513 aa38.14■■■■□ 3.7
PKDCC-202ENST00000401498 CRY2Q49AN0 593 aa38.14■■■■□ 3.7
PKDCC-202ENST00000401498 ATF7IPQ6VMQ6 1270 aa38.14■■■■□ 3.7
PKDCC-202ENST00000401498 NLRP3Q96P20 1036 aa38.14■■■■□ 3.7
PKDCC-202ENST00000401498 PIM2Q9P1W9 311 aa38.13■■■■□ 3.69
PKDCC-202ENST00000401498 TNNQ9UQP3 1299 aa38.13■■■■□ 3.69
PKDCC-202ENST00000401498 ZKSCAN2Q63HK3 967 aa38.11■■■■□ 3.69
PKDCC-202ENST00000401498 UBE3BQ7Z3V4 1068 aa38.11■■■■□ 3.69
PKDCC-202ENST00000401498 CDHR2Q9BYE9 1310 aa38.11■■■■□ 3.69
PKDCC-202ENST00000401498 CASP7P55210 303 aa38.1■■■■□ 3.69
PKDCC-202ENST00000401498 ZNF622Q969S3 477 aaKnown RBP eCLIP38.1■■■■□ 3.69
PKDCC-202ENST00000401498 MASTLQ96GX5 879 aa38.1■■■■□ 3.69
PKDCC-202ENST00000401498 UTRNP46939 3433 aa38.1■■■■□ 3.69
PKDCC-202ENST00000401498 ABCC4O15439 1325 aa38.09■■■■□ 3.69
PKDCC-202ENST00000401498 NPR1P16066 1061 aa38.08■■■■□ 3.69
PKDCC-202ENST00000401498 STYK1Q6J9G0 422 aa38.08■■■■□ 3.69
PKDCC-202ENST00000401498 GRM8O00222 908 aa38.06■■■■□ 3.68
PKDCC-202ENST00000401498 CCT4P50991 539 aaKnown RBP38.06■■■■□ 3.68
PKDCC-202ENST00000401498 PELP1Q8IZL8 1130 aaKnown RBP38.06■■■■□ 3.68
PKDCC-202ENST00000401498 YBX3P16989 372 aaKnown RBP eCLIP38.06■■■■□ 3.68
PKDCC-202ENST00000401498 CLUAP1Q96AJ1 413 aa38.06■■■■□ 3.68
PKDCC-202ENST00000401498 C9orf78Q9NZ63 289 aaPredicted RBP38.06■■■■□ 3.68
PKDCC-202ENST00000401498 CACNA1SQ13698 1873 aa38.05■■■■□ 3.68
PKDCC-202ENST00000401498 HSP90B1P14625 803 aaKnown RBP38.05■■■■□ 3.68
PKDCC-202ENST00000401498 HOXA10P31260 410 aaPredicted RBP38.05■■■■□ 3.68
PKDCC-202ENST00000401498 TTLL6Q8N841 843 aa38.05■■■■□ 3.68
PKDCC-202ENST00000401498 BCS1LQ9Y276 419 aa38.05■■■■□ 3.68
PKDCC-202ENST00000401498 PDE8AO60658 829 aa38.04■■■■□ 3.68
PKDCC-202ENST00000401498 DALRD3Q5D0E6 543 aaKnown RBP38.04■■■■□ 3.68
PKDCC-202ENST00000401498 RPGRQ92834 1020 aaKnown RBP38.04■■■■□ 3.68
PKDCC-202ENST00000401498 SF3B3Q15393 1217 aaKnown RBP38.03■■■■□ 3.68
PKDCC-202ENST00000401498 GPR162Q16538 588 aa38.03■■■■□ 3.68
PKDCC-202ENST00000401498 MYH3P11055 1940 aa38.03■■■■□ 3.68
PKDCC-202ENST00000401498 INTS3Q68E01 1043 aaKnown RBP38.02■■■■□ 3.68
PKDCC-202ENST00000401498 CNKSR1Q969H4 720 aa38.02■■■■□ 3.68
PKDCC-202ENST00000401498 SLX4Q8IY92 1834 aa38.02■■■■□ 3.68
PKDCC-202ENST00000401498 ARFGEF1Q9Y6D6 1849 aa38.02■■■■□ 3.68
PKDCC-202ENST00000401498 USP44Q9H0E7 712 aa38.02■■■■□ 3.68
PKDCC-202ENST00000401498 UTYO14607 1347 aa38.01■■■■□ 3.68
PKDCC-202ENST00000401498 NBPF7P0C2Y1 421 aaPredicted RBP38.01■■■■□ 3.67
PKDCC-202ENST00000401498 PLA2G12BQ9BX93 195 aa38■■■■□ 3.67
PKDCC-202ENST00000401498 RBM17Q96I25 401 aaKnown RBP37.99■■■■□ 3.67
PKDCC-202ENST00000401498 TAF1P21675 1872 aa37.99■■■■□ 3.67
PKDCC-202ENST00000401498 ALDH1B1P30837 517 aa37.98■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms