RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 UGGT2Q9NYU1 1516 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 PTPRKQ15262 1439 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 MYOM3Q5VTT5 1437 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 A0A1W2PNR3 127 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 IQGAP2Q13576 1575 aa9.61□□□□□ -0.87
CSNK2A1-204ENST00000400227 UBAP2LQ14157 1087 aaKnown RBP9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 NLRP8Q86W28 1048 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 GPR161Q8N6U8 529 aaKnown RBP9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 HFM1A2PYH4 1435 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
CSNK2A1-204ENST00000400227 PDE4CQ08493 712 aa9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 GTPBP3Q969Y2 492 aaKnown RBP9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 COL26A1Q96A83 441 aa9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■■ 32.6
CSNK2A1-204ENST00000400227 TCOF1Q13428 1488 aaKnown RBP9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 SSFA2P28290 1259 aa9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 RTN1Q16799 776 aa9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
CSNK2A1-204ENST00000400227 FIGNL1Q6PIW4 674 aa9.58□□□□□ -0.88
CSNK2A1-204ENST00000400227 KLRG1Q96E93 195 aa9.58□□□□□ -0.88
CSNK2A1-204ENST00000400227 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
CSNK2A1-204ENST00000400227 WDR62O43379 1518 aa9.58□□□□□ -0.88
CSNK2A1-204ENST00000400227 NAIPQ13075 1403 aa9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 GCC2Q8IWJ2 1684 aa9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 MYO19Q96H55 970 aa9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 ZCCHC2Q9C0B9 1178 aaKnown RBP9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 GJA3Q9Y6H8 435 aa9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
CSNK2A1-204ENST00000400227 GPR25O00155 361 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 TRERF1Q96PN7 1200 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 MKNK1Q9BUB5 465 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CSNK2A1-204ENST00000400227 EPRSP07814 1512 aaKnown RBP9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 GMPRP36959 345 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 CAPN12Q6ZSI9 719 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 SUSD3Q96L08 255 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 ANKIB1Q9P2G1 1089 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 PCDHGC4Q9Y5F7 938 aa9.55□□□□□ -0.88
CSNK2A1-204ENST00000400227 HIF1AQ16665 826 aa9.54□□□□□ -0.88
CSNK2A1-204ENST00000400227 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
CSNK2A1-204ENST00000400227 CFHR5Q9BXR6 569 aa9.54□□□□□ -0.88
CSNK2A1-204ENST00000400227 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
CSNK2A1-204ENST00000400227 ATXN7O15265 892 aaPredicted RBP9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 GAS6Q14393 721 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 ATXN7L1Q9ULK2 861 aaPredicted RBP9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 PHF24Q9UPV7 400 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 ZNF608Q9ULD9 1512 aaPredicted RBP9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 AKNAQ7Z591 1439 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 BNIP3LO60238 219 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 COX20Q5RI15 118 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 C16orf46Q6P387 395 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 LRFN2Q9ULH4 789 aa9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 CDK13Q14004 1512 aaKnown RBP9.53□□□□□ -0.88
CSNK2A1-204ENST00000400227 FAM157BP0CG42 384 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 SCNN1AP37088 669 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 KRT76Q01546 638 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 DGKZQ13574 1117 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 NAA30Q147X3 362 aaPredicted RBP9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 C11orf91Q3C1V1 193 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 SAP130Q9H0E3 1048 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 KIAA0556O60303 1618 aa9.52□□□□□ -0.89
CSNK2A1-204ENST00000400227 MIA2Q96PC5 1412 aa9.51□□□□□ -0.89
CSNK2A1-204ENST00000400227 KDM6BO15054 1643 aa9.51□□□□□ -0.89
CSNK2A1-204ENST00000400227 TNP2Q05952 138 aa9.51□□□□□ -0.89
CSNK2A1-204ENST00000400227 IER5Q5VY09 327 aa9.51□□□□□ -0.89
CSNK2A1-204ENST00000400227 SEPT3Q9UH03 358 aa9.51□□□□□ -0.89
CSNK2A1-204ENST00000400227 DISP1Q96F81 1524 aa9.5□□□□□ -0.89
CSNK2A1-204ENST00000400227 KIAA0586Q9BVV6 1533 aa9.5□□□□□ -0.89
CSNK2A1-204ENST00000400227 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
CSNK2A1-204ENST00000400227 TGFBR3LH3BV60 316 aa9.5□□□□□ -0.89
CSNK2A1-204ENST00000400227 WIPF1O43516 503 aa9.5□□□□□ -0.89
CSNK2A1-204ENST00000400227 DCDC2BA2VCK2 349 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 KHNYNO15037 678 aaKnown RBP9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 EFSO43281 561 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms