RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 GJA3Q9Y6H8 435 aa24.43■■□□□ 1.5
COL4A2-202ENST00000400163 WDR33Q9C0J8 1336 aaKnown RBP24.42■■□□□ 1.5
COL4A2-202ENST00000400163 ABT1Q9ULW3 272 aaKnown RBP24.42■■□□□ 1.5
COL4A2-202ENST00000400163 COL4A5P29400 1685 aa24.42■■□□□ 1.5
COL4A2-202ENST00000400163 HOXA10P31260 410 aaPredicted RBP24.41■■□□□ 1.5
COL4A2-202ENST00000400163 DDX21Q9NR30 783 aaKnown RBP eCLIP24.41■■□□□ 1.5
COL4A2-202ENST00000400163 MAP3K15Q6ZN16 1313 aa24.4■■□□□ 1.5
COL4A2-202ENST00000400163 HSPA8P11142 646 aaKnown RBP24.4■■□□□ 1.5
COL4A2-202ENST00000400163 LMOD1P29536 600 aaPredicted RBP24.4■■□□□ 1.5
COL4A2-202ENST00000400163 RPGRQ92834 1020 aaKnown RBP24.4■■□□□ 1.5
COL4A2-202ENST00000400163 LTBP1Q14766 1721 aa24.4■■□□□ 1.5
COL4A2-202ENST00000400163 MAP2K1Q02750 393 aaPredicted RBP24.39■■□□□ 1.49
COL4A2-202ENST00000400163 TTLL7Q6ZT98 887 aa24.39■■□□□ 1.49
COL4A2-202ENST00000400163 RRP7AQ9Y3A4 280 aaKnown RBP24.39■■□□□ 1.49
COL4A2-202ENST00000400163 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 GPTP24298 496 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 EPS15P42566 896 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 SCNN1DP51172 638 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 GRIPAP1Q4V328 841 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 KIF6Q6ZMV9 814 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
COL4A2-202ENST00000400163 KDM3BQ7LBC6 1761 aa24.38■■□□□ 1.49
COL4A2-202ENST00000400163 UBN2Q6ZU65 1347 aa24.37■■□□□ 1.49
COL4A2-202ENST00000400163 FMR1Q06787 632 aaKnown RBP eCLIP24.37■■□□□ 1.49
COL4A2-202ENST00000400163 SUSD4Q5VX71 490 aa24.37■■□□□ 1.49
COL4A2-202ENST00000400163 CRAMP1Q96RY5 1269 aa24.37■■□□□ 1.49
COL4A2-202ENST00000400163 RIC1Q4ADV7 1423 aa24.36■■□□□ 1.49
COL4A2-202ENST00000400163 SLC51AQ86UW1 340 aa24.36■■□□□ 1.49
COL4A2-202ENST00000400163 ZBTB3Q9H5J0 574 aa24.36■■□□□ 1.49
COL4A2-202ENST00000400163 IBTKQ9P2D0 1353 aaPredicted RBP24.36■■□□□ 1.49
COL4A2-202ENST00000400163 TCERG1O14776 1098 aaKnown RBP24.35■■□□□ 1.49
COL4A2-202ENST00000400163 MYL6BP14649 208 aa24.35■■□□□ 1.49
COL4A2-202ENST00000400163 EIF4A1P60842 406 aaKnown RBP24.35■■□□□ 1.49
COL4A2-202ENST00000400163 RBM17Q96I25 401 aaKnown RBP24.35■■□□□ 1.49
COL4A2-202ENST00000400163 TRPM7Q96QT4 1865 aa24.34■■□□□ 1.49
COL4A2-202ENST00000400163 PPEF1O14829 653 aaPredicted RBP24.34■■□□□ 1.49
COL4A2-202ENST00000400163 ZNF34Q8IZ26 560 aa24.34■■□□□ 1.49
COL4A2-202ENST00000400163 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
COL4A2-202ENST00000400163 USP50Q70EL3 339 aaPredicted RBP24.33■■□□□ 1.49
COL4A2-202ENST00000400163 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
COL4A2-202ENST00000400163 CAPNS2Q96L46 248 aa24.33■■□□□ 1.49
COL4A2-202ENST00000400163 NTSR2O95665 410 aa24.32■■□□□ 1.48
COL4A2-202ENST00000400163 NEFMP07197 916 aa24.32■■□□□ 1.48
COL4A2-202ENST00000400163 CST9Q5W186 159 aa24.32■■□□□ 1.48
COL4A2-202ENST00000400163 C3orf67Q6ZVT6 689 aa24.32■■□□□ 1.48
COL4A2-202ENST00000400163 PAXIP1Q6ZW49 1069 aaPredicted RBP24.32■■□□□ 1.48
COL4A2-202ENST00000400163 TRAF5O00463 557 aa24.31■■□□□ 1.48
COL4A2-202ENST00000400163 ECE1P42892 770 aa24.31■■□□□ 1.48
COL4A2-202ENST00000400163 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
COL4A2-202ENST00000400163 THSD7BQ9C0I4 1608 aa24.31■■□□□ 1.48
COL4A2-202ENST00000400163 PPIP5K2O43314 1243 aa24.3■■□□□ 1.48
COL4A2-202ENST00000400163 GRM1Q13255 1194 aa24.3■■□□□ 1.48
COL4A2-202ENST00000400163 CYP4F22Q6NT55 531 aa24.3■■□□□ 1.48
COL4A2-202ENST00000400163 GPR101Q96P66 508 aaPredicted RBP24.3■■□□□ 1.48
COL4A2-202ENST00000400163 THUMPD2Q9BTF0 503 aaKnown RBP24.3■■□□□ 1.48
COL4A2-202ENST00000400163 PPP1R42Q7Z4L9 355 aa24.29■■□□□ 1.48
COL4A2-202ENST00000400163 BEGAINQ9BUH8 593 aa24.29■■□□□ 1.48
COL4A2-202ENST00000400163 AOC3Q16853 763 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 NLRP3Q96P20 1036 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 TMX4Q9H1E5 349 aaPredicted RBP24.28■■□□□ 1.48
COL4A2-202ENST00000400163 GPRC5DQ9NZD1 345 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 ATP6V0A2Q9Y487 856 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 TLL2Q9Y6L7 1015 aa24.28■■□□□ 1.48
COL4A2-202ENST00000400163 NFE2L2Q16236 605 aa24.27■■□□□ 1.48
COL4A2-202ENST00000400163 PARP10Q53GL7 1025 aa24.27■■□□□ 1.48
COL4A2-202ENST00000400163 VPS33BQ9H267 617 aa24.27■■□□□ 1.48
COL4A2-202ENST00000400163 ADARB2Q9NS39 739 aaKnown RBP24.27■■□□□ 1.48
COL4A2-202ENST00000400163 ERBB4Q15303 1308 aa24.27■■□□□ 1.48
COL4A2-202ENST00000400163 CXCL9Q07325 125 aa24.25■■□□□ 1.47
COL4A2-202ENST00000400163 SLC10A5Q5PT55 438 aa24.25■■□□□ 1.47
COL4A2-202ENST00000400163 ZNRF3Q9ULT6 936 aa24.25■■□□□ 1.47
COL4A2-202ENST00000400163 LRP10Q7Z4F1 713 aa24.24■■□□□ 1.47
COL4A2-202ENST00000400163 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
COL4A2-202ENST00000400163 AOC2O75106 756 aa24.23■■□□□ 1.47
COL4A2-202ENST00000400163 MAP2K2P36507 400 aa24.23■■□□□ 1.47
COL4A2-202ENST00000400163 FAM161AQ3B820 660 aa24.23■■□□□ 1.47
COL4A2-202ENST00000400163 SUPT20HQ8NEM7 779 aa24.23■■□□□ 1.47
COL4A2-202ENST00000400163 RTFDC1Q9BY42 306 aaPredicted RBP24.23■■□□□ 1.47
COL4A2-202ENST00000400163 ABCC4O15439 1325 aa24.23■■□□□ 1.47
COL4A2-202ENST00000400163 GMPSP49915 693 aaPredicted RBP24.22■■□□□ 1.47
COL4A2-202ENST00000400163 PDIA6Q15084 440 aa24.22■■□□□ 1.47
COL4A2-202ENST00000400163 CELF2O95319 508 aaKnown RBP24.21■■□□□ 1.47
COL4A2-202ENST00000400163 SAPCD2Q86UD0 394 aa24.21■■□□□ 1.47
COL4A2-202ENST00000400163 TSKSQ9UJT2 592 aa24.21■■□□□ 1.47
COL4A2-202ENST00000400163 CCDC85CA6NKD9 419 aa24.2■■□□□ 1.46
COL4A2-202ENST00000400163 BBOX1O75936 387 aa24.2■■□□□ 1.46
COL4A2-202ENST00000400163 EIF2S2P20042 333 aaKnown RBP24.2■■□□□ 1.46
COL4A2-202ENST00000400163 DPP8Q6V1X1 898 aaPredicted RBP24.2■■□□□ 1.46
COL4A2-202ENST00000400163 SP8Q8IXZ3 490 aa24.2■■□□□ 1.46
COL4A2-202ENST00000400163 MPNDQ8N594 471 aa24.2■■□□□ 1.46
COL4A2-202ENST00000400163 GLIS2Q9BZE0 524 aaPredicted RBP24.2■■□□□ 1.46
COL4A2-202ENST00000400163 PGAP2Q9UHJ9 254 aa24.2■■□□□ 1.46
COL4A2-202ENST00000400163 LAMB2P55268 1798 aa24.19■■□□□ 1.46
COL4A2-202ENST00000400163 PROSER3Q2NL68 480 aa24.19■■□□□ 1.46
COL4A2-202ENST00000400163 CIAPIN1Q6FI81 312 aa24.19■■□□□ 1.46
COL4A2-202ENST00000400163 TSPYL4Q9UJ04 414 aa24.19■■□□□ 1.46
COL4A2-202ENST00000400163 MAPK8IP3Q9UPT6 1336 aa24.18■■□□□ 1.46
COL4A2-202ENST00000400163 ANXA1P04083 346 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms