RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
COL25A1-202ENST00000399127 AFDNP55196 1824 aaKnown RBP14.28□□□□□ -0.12
COL25A1-202ENST00000399127 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
COL25A1-202ENST00000399127 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
COL25A1-202ENST00000399127 ARFGEF2Q9Y6D5 1785 aa14.27□□□□□ -0.12
COL25A1-202ENST00000399127 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.12
COL25A1-202ENST00000399127 SGSM2O43147 1006 aa14.27□□□□□ -0.13
COL25A1-202ENST00000399127 PKP1Q13835 747 aa14.27□□□□□ -0.13
COL25A1-202ENST00000399127 GPATCH3Q96I76 525 aa14.27□□□□□ -0.13
COL25A1-202ENST00000399127 RRAGDQ9NQL2 400 aaPredicted RBP14.27□□□□□ -0.13
COL25A1-202ENST00000399127 SPATA31A1Q5TZJ5 1347 aa14.27□□□□□ -0.13
COL25A1-202ENST00000399127 TRAK2O60296 914 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
COL25A1-202ENST00000399127 CHMP3Q9Y3E7 222 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 JCADQ9P266 1359 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 SHANK3Q9BYB0 1731 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 PLCH1Q4KWH8 1693 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 DIAPH3Q9NSV4 1193 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 LAMB4A4D0S4 1761 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 KCPQ6ZWJ8 1503 aa14.26□□□□□ -0.13
COL25A1-202ENST00000399127 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
COL25A1-202ENST00000399127 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
COL25A1-202ENST00000399127 ASAP1Q9ULH1 1129 aa14.25□□□□□ -0.13
COL25A1-202ENST00000399127 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
COL25A1-202ENST00000399127 DDB1Q16531 1140 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 GBP4Q96PP9 640 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 DISP2A7MBM2 1401 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 TMX3Q96JJ7 454 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 LSG1Q9H089 658 aaKnown RBP14.24□□□□□ -0.13
COL25A1-202ENST00000399127 RAD50Q92878 1312 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 UBR2Q8IWV8 1755 aa14.24□□□□□ -0.13
COL25A1-202ENST00000399127 HSPA1LP34931 641 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 HSPA4P34932 840 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
COL25A1-202ENST00000399127 ANAPC15P60006 121 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 TFCP2Q12800 502 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 PIGBQ92521 554 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 SPATA31A5Q5VU36 1347 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 SPATA31A7Q8IWB4 1347 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 TOGARAM1Q9Y4F4 1720 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 CASP7P55210 303 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 MEX3CQ5U5Q3 659 aaKnown RBP14.23□□□□□ -0.13
COL25A1-202ENST00000399127 NDUFB9Q9Y6M9 179 aa14.23□□□□□ -0.13
COL25A1-202ENST00000399127 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 EDC3Q96F86 508 aaKnown RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 COPRSQ9NQ92 184 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 PTH1RQ03431 593 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 FAM98CQ17RN3 349 aaKnown RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 DNAJC10Q8IXB1 793 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
COL25A1-202ENST00000399127 CDCA7Q9BWT1 371 aaPredicted RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
COL25A1-202ENST00000399127 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
COL25A1-202ENST00000399127 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.13
COL25A1-202ENST00000399127 SNX14Q9Y5W7 946 aa14.21□□□□□ -0.13
COL25A1-202ENST00000399127 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
COL25A1-202ENST00000399127 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
COL25A1-202ENST00000399127 SLIT2O94813 1529 aa14.21□□□□□ -0.14
COL25A1-202ENST00000399127 TNS2Q63HR2 1409 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 CPA1P15085 419 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 FOXO4P98177 505 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 PAPPAQ13219 1627 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 H7C1W4 665 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 BAG4O95429 457 aaKnown RBP14.2□□□□□ -0.14
COL25A1-202ENST00000399127 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
COL25A1-202ENST00000399127 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 CHAMP1Q96JM3 812 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 NRAPQ86VF7 1730 aa14.2□□□□□ -0.14
COL25A1-202ENST00000399127 RUFY2Q8WXA3 655 aa14.19□□□□□ -0.14
COL25A1-202ENST00000399127 USP21Q9UK80 565 aa14.19□□□□□ -0.14
COL25A1-202ENST00000399127 NUCB2P80303 420 aa14.19□□□□□ -0.14
COL25A1-202ENST00000399127 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
COL25A1-202ENST00000399127 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
COL25A1-202ENST00000399127 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 MARCH10Q8NA82 808 aaPredicted RBP14.18□□□□□ -0.14
COL25A1-202ENST00000399127 CCDC85AQ96PX6 553 aaPredicted RBP14.18□□□□□ -0.14
COL25A1-202ENST00000399127 DBNDD2Q9BQY9 259 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 CWC22Q9HCG8 908 aaKnown RBP14.18□□□□□ -0.14
COL25A1-202ENST00000399127 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 NUP188Q5SRE5 1749 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 CHGBP05060 677 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
COL25A1-202ENST00000399127 MCM2P49736 904 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
COL25A1-202ENST00000399127 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms