RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 G2E3Q7L622 706 aa18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 MASTLQ96GX5 879 aa18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
HLA-DQB1-202ENST00000399079 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
HLA-DQB1-202ENST00000399079 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ZNF784Q8NCA9 323 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-202ENST00000399079 TNRC6CQ9HCJ0 1690 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 NPR1P16066 1061 aa18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 CDCA7LQ96GN5 454 aa18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ISCA1Q9BUE6 129 aa18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ANKRD36CQ5JPF3 1778 aa18.11■□□□□ 0.49
HLA-DQB1-202ENST00000399079 C21orf2O43822 256 aa18.1■□□□□ 0.49
HLA-DQB1-202ENST00000399079 PRPF40BQ6NWY9 871 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-202ENST00000399079 CNKSR1Q969H4 720 aa18.1■□□□□ 0.49
HLA-DQB1-202ENST00000399079 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 HCLS1P14317 486 aaPredicted RBP18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 MYD88Q99836 296 aa18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
HLA-DQB1-202ENST00000399079 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.49
HLA-DQB1-202ENST00000399079 RASSF7Q02833 373 aa18.08■□□□□ 0.49
HLA-DQB1-202ENST00000399079 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.49
HLA-DQB1-202ENST00000399079 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.49
HLA-DQB1-202ENST00000399079 SLX4Q8IY92 1834 aa18.08■□□□□ 0.49
HLA-DQB1-202ENST00000399079 E9PSI1 815 aa18.08■□□□□ 0.48
HLA-DQB1-202ENST00000399079 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
HLA-DQB1-202ENST00000399079 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.48
HLA-DQB1-202ENST00000399079 KSR2Q6VAB6 950 aa18.08■□□□□ 0.48
HLA-DQB1-202ENST00000399079 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
HLA-DQB1-202ENST00000399079 ADCY9O60503 1353 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 SH3TC1Q8TE82 1336 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 FLIIQ13045 1269 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 TRIM28Q13263 835 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 OLFM4Q6UX06 510 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
HLA-DQB1-202ENST00000399079 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
HLA-DQB1-202ENST00000399079 NFKBIEO00221 500 aa18.06■□□□□ 0.48
HLA-DQB1-202ENST00000399079 C9orf131Q5VYM1 1079 aa18.06■□□□□ 0.48
HLA-DQB1-202ENST00000399079 RPGRQ92834 1020 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-202ENST00000399079 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
HLA-DQB1-202ENST00000399079 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
HLA-DQB1-202ENST00000399079 PRELPP51888 382 aa18.05■□□□□ 0.48
HLA-DQB1-202ENST00000399079 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
HLA-DQB1-202ENST00000399079 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-202ENST00000399079 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-202ENST00000399079 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-202ENST00000399079 IGKV5-2P06315 115 aa18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 RBM17Q96I25 401 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-202ENST00000399079 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-202ENST00000399079 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-202ENST00000399079 F6X3S4 739 aa18.01■□□□□ 0.47
HLA-DQB1-202ENST00000399079 IRS4O14654 1257 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-202ENST00000399079 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
HLA-DQB1-202ENST00000399079 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
HLA-DQB1-202ENST00000399079 LMNB1P20700 586 aa18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 SOGA3Q5TF21 947 aa18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 DNAAF4Q8WXU2 420 aa18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 SBF1O95248 1867 aa18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 ABCC4O15439 1325 aa18■□□□□ 0.47
HLA-DQB1-202ENST00000399079 LAMB2P55268 1798 aa17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 PCCAP05165 728 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 CCDC93Q567U6 631 aa17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 DDX60Q8IY21 1712 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
HLA-DQB1-202ENST00000399079 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 CACNA1FO60840 1977 aa17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-202ENST00000399079 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-202ENST00000399079 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-202ENST00000399079 LTBP3Q9NS15 1303 aa17.96■□□□□ 0.47
HLA-DQB1-202ENST00000399079 RTKN2Q8IZC4 609 aa17.96■□□□□ 0.47
HLA-DQB1-202ENST00000399079 SNED1Q8TER0 1413 aa17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 GCKRQ14397 625 aa17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 TAF1P21675 1872 aa17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
HLA-DQB1-202ENST00000399079 PDE8AO60658 829 aa17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 BBOX1O75936 387 aa17.94■□□□□ 0.46
HLA-DQB1-202ENST00000399079 GRAPQ13588 217 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms