RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
C4orf3-201ENST00000399075 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 TATP17735 454 aaPredicted RBP13.66□□□□□ -0.22
C4orf3-201ENST00000399075 PTH1RQ03431 593 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
C4orf3-201ENST00000399075 MEGF6O75095 1541 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
C4orf3-201ENST00000399075 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
C4orf3-201ENST00000399075 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 CYP46A1Q9Y6A2 500 aa13.66□□□□□ -0.22
C4orf3-201ENST00000399075 JCADQ9P266 1359 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 STX6O43752 255 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 PDRG1Q9NUG6 133 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 PRDM4Q9UKN5 801 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 SMC3Q9UQE7 1217 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 ZKSCAN1P17029 563 aaPredicted RBP13.65□□□□□ -0.22
C4orf3-201ENST00000399075 GCKRQ14397 625 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 SYT1P21579 422 aa13.65□□□□□ -0.22
C4orf3-201ENST00000399075 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
C4orf3-201ENST00000399075 JAKMIP1Q96N16 626 aaKnown RBP13.65□□□□□ -0.22
C4orf3-201ENST00000399075 MED23Q9ULK4 1368 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
C4orf3-201ENST00000399075 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 TSPY26PQ9H489 355 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 XAGE3Q8WTP9 111 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
C4orf3-201ENST00000399075 RFX7Q2KHR2 1363 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 F13A1P00488 732 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 ALDH8A1Q9H2A2 487 aaPredicted RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 NOL7Q9UMY1 257 aaKnown RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 GLI3P10071 1580 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 TCHHQ07283 1943 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 PSMA5P28066 241 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
C4orf3-201ENST00000399075 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
C4orf3-201ENST00000399075 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 MSNP26038 577 aaKnown RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 NFATC2IPQ8NCF5 419 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 MCM5P33992 734 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 UBE2HP62256 183 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 COPS6Q7L5N1 327 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 LARGE1O95461 756 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 CCDC183Q5T5S1 534 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
C4orf3-201ENST00000399075 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
C4orf3-201ENST00000399075 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 MYD88Q99836 296 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 SLC27A2O14975 620 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 MYL6BP14649 208 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 CPA1P15085 419 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 GJB2P29033 226 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 FSD1Q9BTV5 496 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 CNPY2Q9Y2B0 182 aa13.61□□□□□ -0.23
C4orf3-201ENST00000399075 CPDO75976 1380 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
C4orf3-201ENST00000399075 ATF3P18847 181 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
C4orf3-201ENST00000399075 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 MTMR6Q9Y217 621 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 ATP5JP18859 108 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 EPHA10Q5JZY3 1008 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 CCDC39Q9UFE4 941 aa13.6□□□□□ -0.23
C4orf3-201ENST00000399075 KCNJ4P48050 445 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 SIL1Q9H173 461 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 OFD1O75665 1012 aa13.59□□□□□ -0.23
C4orf3-201ENST00000399075 ME3Q16798 604 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms