RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 PTPRCP08575 1304 aa13.35□□□□□ -0.27
CYCSP55-201ENST00000399027 TGFB2P61812 414 aa13.34□□□□□ -0.27
CYCSP55-201ENST00000399027 NLGN2Q8NFZ4 835 aa13.34□□□□□ -0.27
CYCSP55-201ENST00000399027 ST5P78524 1137 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 MYD88Q99836 296 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.28
CYCSP55-201ENST00000399027 CCDC191Q8NCU4 936 aa13.32□□□□□ -0.28
CYCSP55-201ENST00000399027 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
CYCSP55-201ENST00000399027 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
CYCSP55-201ENST00000399027 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
CYCSP55-201ENST00000399027 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
CYCSP55-201ENST00000399027 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 KCNA3P22001 575 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 PDE6BP35913 854 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 NEXNQ0ZGT2 675 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
CYCSP55-201ENST00000399027 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 F6X3S4 739 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 NPHP1O15259 732 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 NUTM1Q86Y26 1132 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
CYCSP55-201ENST00000399027 DPEP1P16444 411 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 CCDC24Q8N4L8 307 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 YTHDC1Q96MU7 727 aaKnown RBP13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 TRMT112Q9UI30 125 aaKnown RBP13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 TAF1P21675 1872 aa13.29□□□□□ -0.28
CYCSP55-201ENST00000399027 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 BCAR3O75815 825 aa13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 PCCAP05165 728 aaPredicted RBP13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 CHRNA5P30532 468 aa13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
CYCSP55-201ENST00000399027 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.28
CYCSP55-201ENST00000399027 H0YIN7 160 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 SRGNP10124 158 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 GCKRQ14397 625 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 SYNE4Q8N205 404 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 FAM89AQ96GI7 184 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 CHD4Q14839 1912 aa13.27□□□□□ -0.29
CYCSP55-201ENST00000399027 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 H7C1W4 665 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 STYK1Q6J9G0 422 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 SPEF2Q9C093 1822 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 PIM2Q9P1W9 311 aa13.26□□□□□ -0.29
CYCSP55-201ENST00000399027 ABCC4O15439 1325 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 IPO8O15397 1037 aaKnown RBP13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 CASP7P55210 303 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 SBF1O95248 1867 aa13.25□□□□□ -0.29
CYCSP55-201ENST00000399027 UTYO14607 1347 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 HSP90B1P14625 803 aaKnown RBP13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 NPR1P16066 1061 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
CYCSP55-201ENST00000399027 PDE8AO60658 829 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 TRIM27P14373 513 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 COL4A1P02462 1669 aa13.23□□□□□ -0.29
CYCSP55-201ENST00000399027 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 DICER1Q9UPY3 1922 aaKnown RBP13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 GRM8O00222 908 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms