RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 SLU7O95391 586 aaKnown RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 LTKP29376 864 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 DACT1Q9NYF0 836 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 GABPB1Q06547 395 aaPredicted RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 UTP14CQ5TAP6 766 aaKnown RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 ANKRD20A12PQ8NF67 263 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 GPT2Q8TD30 523 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 SH2B1Q9NRF2 756 aaPredicted RBP17.04■□□□□ 0.32
RPRD1A-202ENST00000399022 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 DNAJC25Q9H1X3 360 aa17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-202ENST00000399022 TYRO3Q06418 890 aa17.02■□□□□ 0.32
RPRD1A-202ENST00000399022 TMC6Q7Z403 805 aa17.02■□□□□ 0.32
RPRD1A-202ENST00000399022 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.32
RPRD1A-202ENST00000399022 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
RPRD1A-202ENST00000399022 METP08581 1390 aa17.02■□□□□ 0.32
RPRD1A-202ENST00000399022 F13A1P00488 732 aa17.02■□□□□ 0.31
RPRD1A-202ENST00000399022 PLXNC1O60486 1568 aa17.02■□□□□ 0.31
RPRD1A-202ENST00000399022 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 ERICH2A1L162 156 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 DTNBO60941 627 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 C10orf67Q8IYJ2 551 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 FAM193AP78312 1265 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 GTF2A1P52655 376 aaPredicted RBP17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 TXLNBQ8N3L3 684 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 LGR6Q9HBX8 967 aa17.01■□□□□ 0.31
RPRD1A-202ENST00000399022 GSDMDP57764 484 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 TBX22Q9Y458 520 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 EVI5LQ96CN4 794 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 MTMR7Q9Y216 660 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 NEO1Q92859 1461 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
RPRD1A-202ENST00000399022 DNAI1Q9UI46 699 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 MAP3K5Q99683 1374 aa17■□□□□ 0.31
RPRD1A-202ENST00000399022 CBFA2T2O43439 604 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 GUCY1B3Q02153 619 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 GCP02774 474 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 IPO4Q8TEX9 1081 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 IDH1O75874 414 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 CHMLP26374 656 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 KRT32Q14532 448 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 UNC13BO14795 1591 aa16.99■□□□□ 0.31
RPRD1A-202ENST00000399022 BIN1O00499 593 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 ANAPC15P60006 121 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 KIF1BO60333 1816 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 GRM8O00222 908 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 CPA1P15085 419 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 USP8P40818 1118 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 ABCC4O15439 1325 aa16.98■□□□□ 0.31
RPRD1A-202ENST00000399022 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 GOLIM4O00461 696 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 KIAA0754O94854 1291 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 SYT1P21579 422 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 STX1AQ16623 288 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 PPFIBP1Q86W92 1011 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 CASQ1P31415 396 aa16.97■□□□□ 0.31
RPRD1A-202ENST00000399022 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 TET3O43151 1660 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 CTAGE5O15320 804 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 GPTP24298 496 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 ELF2Q15723 593 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
RPRD1A-202ENST00000399022 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms