RNA–Protein interactions for RNA: ENST00000399003.1

AP002358.1-201, humanhuman

TSL 2 BASIC

Gene AP002358.1, Length 2,805 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002358.1-201ENST00000399003 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
AP002358.1-201ENST00000399003 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
AP002358.1-201ENST00000399003 SOX12O15370 315 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 SLC26A8Q96RN1 970 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 U2AF2P26368 475 aaKnown RBP eCLIP10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 CYP46A1Q9Y6A2 500 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 PLEKHG2Q9H7P9 1386 aa10.08□□□□□ -0.8
AP002358.1-201ENST00000399003 IGSF3O75054 1194 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 DNAJC2Q99543 621 aaKnown RBP10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 MED23Q9ULK4 1368 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 PI4KAP2A4QPH2 592 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 ADCY5O95622 1261 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 ST3GAL1Q11201 340 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 PI4KAP1Q8N8J0 262 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 NECTIN2Q92692 538 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 DBF4Q9UBU7 674 aaPredicted RBP10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 LAMA4Q16363 1823 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 MST1RQ04912 1400 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 LAMB4A4D0S4 1761 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 COL15A1P39059 1388 aa10.07□□□□□ -0.8
AP002358.1-201ENST00000399003 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 CCDC66A2RUB6 948 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 CTIFO43310 598 aaKnown RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 GJB2P29033 226 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 THEMISQ8N1K5 641 aaPredicted RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PXDNQ92626 1479 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 FAM177BA6PVY3 158 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 LARGE1O95461 756 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PDCP20941 246 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 AMOTQ4VCS5 1084 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 CWC27Q6UX04 472 aaKnown RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 MAP4K1Q92918 833 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PSMA5P28066 241 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 KCNJ4P48050 445 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 PTH1RQ03431 593 aa10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 RBM43Q6ZSC3 357 aaKnown RBP10.06□□□□□ -0.8
AP002358.1-201ENST00000399003 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 ZKSCAN1P17029 563 aaPredicted RBP10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 KSR2Q6VAB6 950 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 KCNH5Q8NCM2 988 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 ARFGEF2Q9Y6D5 1785 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 JAKMIP1Q96N16 626 aaKnown RBP10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 SPG7Q9UQ90 795 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
AP002358.1-201ENST00000399003 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 CCDC192P0DO97 292 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 CREB3L3Q68CJ9 461 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 CCDC83Q8IWF9 413 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 FIBPO43427 364 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 KRT85P78386 507 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 ME3Q16798 604 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 KIAA1524Q8TCG1 905 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 TIGD1Q96MW7 591 aa10.04□□□□□ -0.8
AP002358.1-201ENST00000399003 DDX60Q8IY21 1712 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 IFIT2P09913 472 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 DNM1Q05193 864 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 SYCP1Q15431 976 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 LGR6Q9HBX8 967 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 SETD1BQ9UPS6 1966 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 GOLGA6L6A8MZA4 724 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 RNF20Q5VTR2 975 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
AP002358.1-201ENST00000399003 PKD1L3Q7Z443 1732 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms