RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SMC2O95347 1197 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 LRRFIP1Q32MZ4 808 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 LLPHQ9BRT6 129 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 TSPYL1Q9H0U9 437 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 ACBD3Q9H3P7 528 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 LRRFIP2Q9Y608 721 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 NALCNQ8IZF0 1738 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 G2E3Q7L622 706 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 GPATCH11Q8N954 259 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 ZNF830Q96NB3 372 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 RGPD1P0DJD0 1748 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 RDXP35241 583 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 HSP90AB3PQ58FF7 597 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 FUCA2Q9BTY2 467 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 JCADQ9P266 1359 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 ABCC6O95255 1503 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 PES1O00541 588 aaKnown RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 LTKP29376 864 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 CYB5RLQ6IPT4 315 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 ZSCAN16Q9H4T2 348 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-205ENST00000397611 CALCOCO1Q9P1Z2 691 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 ZRANB1Q9UGI0 708 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 PNMA6EA0A0J9YXQ4 647 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 FBXL16Q8N461 479 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 MYRIPQ8NFW9 859 aa6.42□□□□□ -1.38
PTPRD-205ENST00000397611 NECTIN1Q15223 517 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 PDILTQ8N807 584 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 KIAA1524Q8TCG1 905 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 UPF3BQ9BZI7 483 aaKnown RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 LARP1Q6PKG0 1096 aaKnown RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 C16orf71Q8IYS4 520 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 ZFP91Q96JP5 570 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 NOL10Q9BSC4 688 aaKnown RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 MTMR6Q9Y217 621 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 NEXNQ0ZGT2 675 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 GTPBP4Q9BZE4 634 aaKnown RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 CACNA1FO60840 1977 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 CCDC73Q6ZRK6 1079 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 FAM177BA6PVY3 158 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 PALD1Q9ULE6 856 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 USP54Q70EL1 1684 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 NAA16Q6N069 864 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-205ENST00000397611 KRT24Q2M2I5 525 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 CCDC70Q6NSX1 233 aa6.41□□□□□ -1.38
PTPRD-205ENST00000397611 TTLL5Q6EMB2 1281 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 MRFAP1L1Q96HT8 127 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 FEZ1Q99689 392 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-205ENST00000397611 IRX3P78415 501 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-205ENST00000397611 BLOC1S2Q6QNY1 142 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 TIGD1Q96MW7 591 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 CFAP45Q9UL16 551 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 TOPAZ1Q8N9V7 1692 aa6.4□□□□□ -1.38
PTPRD-205ENST00000397611 TDRD7Q8NHU6 1098 aaKnown RBP6.4□□□□□ -1.38
PTPRD-205ENST00000397611 ABCC12Q96J65 1359 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 EVCP57679 992 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 SARM1Q6SZW1 724 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 DHX37Q8IY37 1157 aaKnown RBP6.4□□□□□ -1.39
PTPRD-205ENST00000397611 DEF6Q9H4E7 631 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 MED23Q9ULK4 1368 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 F6X3S4 739 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 IFIT2P09913 472 aaKnown RBP6.4□□□□□ -1.39
PTPRD-205ENST00000397611 C16orf45Q96MC5 204 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-205ENST00000397611 CCDC9Q9Y3X0 531 aaKnown RBP6.4□□□□□ -1.39
PTPRD-205ENST00000397611 LRRC37A3O60309 1634 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 MYO1BO43795 1136 aa6.4□□□□□ -1.39
PTPRD-205ENST00000397611 G3BP1Q13283 466 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 PAXIP1Q6ZW49 1069 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 FMNL2Q96PY5 1086 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 AGXT2Q9BYV1 514 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 PKP1Q13835 747 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 MAP3K11Q16584 847 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 RUFY1Q96T51 708 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 MTA3Q9BTC8 594 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 A0A0G2JS52 829 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 PI4KAP2A4QPH2 592 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 TPM1P09493 284 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 ATP5JP18859 108 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 IBSPP21815 317 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 PI4KAP1Q8N8J0 262 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 TNMDQ9H2S6 317 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 KDM4AO75164 1064 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 CAMK4Q16566 473 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 ZNF530Q6P9A1 599 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 RABL6Q3YEC7 729 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 DNAJC2Q99543 621 aaKnown RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 U3KPZ7 1027 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 AKAP12Q02952 1782 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 FBLN1P23142 703 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 AK2P54819 239 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 NOLC1Q14978 699 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 RASEFQ8IZ41 740 aa6.39□□□□□ -1.39
PTPRD-205ENST00000397611 NAT10Q9H0A0 1025 aaKnown RBP6.39□□□□□ -1.39
PTPRD-205ENST00000397611 NWD1Q149M9 1564 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms