RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NBPF7P0C2Y1 421 aaPredicted RBP18.12■□□□□ 0.49
GNE-202ENST00000396594 RFC4P35249 363 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 LDHAL6AQ6ZMR3 332 aa18.12■□□□□ 0.49
GNE-202ENST00000396594 RTL9Q8NET4 1388 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 IL2RBP14784 551 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 MAGI2Q86UL8 1455 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
GNE-202ENST00000396594 IFIT3O14879 490 aaKnown RBP18.11■□□□□ 0.49
GNE-202ENST00000396594 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
GNE-202ENST00000396594 LEKR1Q6ZMV7 388 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 LINS1Q8NG48 757 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 ZMYM3Q14202 1370 aa18.11■□□□□ 0.49
GNE-202ENST00000396594 AOX1Q06278 1338 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 ZNF804AQ7Z570 1209 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 SBNO1A3KN83 1393 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
GNE-202ENST00000396594 EYA3Q99504 573 aa18.1■□□□□ 0.49
GNE-202ENST00000396594 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
GNE-202ENST00000396594 USO1O60763 962 aaKnown RBP18.09■□□□□ 0.49
GNE-202ENST00000396594 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
GNE-202ENST00000396594 IARSP41252 1262 aaKnown RBP18.09■□□□□ 0.49
GNE-202ENST00000396594 NUCB1Q02818 461 aa18.09■□□□□ 0.49
GNE-202ENST00000396594 BOLA2Q9H3K6 86 aa18.09■□□□□ 0.49
GNE-202ENST00000396594 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
GNE-202ENST00000396594 EHBP1Q8NDI1 1231 aa18.09■□□□□ 0.49
GNE-202ENST00000396594 ZHX3Q9H4I2 956 aa18.09■□□□□ 0.49
GNE-202ENST00000396594 STK24Q9Y6E0 443 aa18.08■□□□□ 0.49
GNE-202ENST00000396594 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
GNE-202ENST00000396594 SPAG1Q07617 926 aa18.08■□□□□ 0.49
GNE-202ENST00000396594 SEPT7Q16181 437 aaKnown RBP18.08■□□□□ 0.49
GNE-202ENST00000396594 PARP10Q53GL7 1025 aa18.08■□□□□ 0.49
GNE-202ENST00000396594 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
GNE-202ENST00000396594 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
GNE-202ENST00000396594 ESR2Q92731 530 aa18.08■□□□□ 0.48
GNE-202ENST00000396594 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
GNE-202ENST00000396594 IFI16Q16666 785 aaKnown RBP18.08■□□□□ 0.48
GNE-202ENST00000396594 RNF214Q8ND24 703 aa18.08■□□□□ 0.48
GNE-202ENST00000396594 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
GNE-202ENST00000396594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
GNE-202ENST00000396594 GBP2P32456 591 aaPredicted RBP18.07■□□□□ 0.48
GNE-202ENST00000396594 IP6K1Q92551 441 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
GNE-202ENST00000396594 PPP1R2P41236 205 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 NLRP5P59047 1200 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 ARHGAP29Q52LW3 1261 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 TUBB4BP68371 445 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 KIAA1328Q86T90 577 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 GRM8O00222 908 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 STX1AQ16623 288 aa18.07■□□□□ 0.48
GNE-202ENST00000396594 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
GNE-202ENST00000396594 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
GNE-202ENST00000396594 RHPN1Q8TCX5 695 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 MINDY4BA8MYZ0 360 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 SETDB2Q96T68 719 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 YEATS4O95619 227 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 NBPF6Q5VWK0 638 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
GNE-202ENST00000396594 NBPF4Q96M43 638 aa18.06■□□□□ 0.48
GNE-202ENST00000396594 CALML3P27482 149 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
GNE-202ENST00000396594 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
GNE-202ENST00000396594 CTAGE1Q96RT6 745 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 RANBP6O60518 1105 aaKnown RBP18.05■□□□□ 0.48
GNE-202ENST00000396594 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
GNE-202ENST00000396594 KCNG4Q8TDN1 519 aa18.05■□□□□ 0.48
GNE-202ENST00000396594 CCDC171Q6TFL3 1326 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 DDB1Q16531 1140 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
GNE-202ENST00000396594 MAST3O60307 1309 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 HOOK2Q96ED9 719 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 KCNA6P17658 529 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 PAF1Q8N7H5 531 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 PI4KAP2A4QPH2 592 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 PI4KAP1Q8N8J0 262 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 SNX21Q969T3 373 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 FERMT1Q9BQL6 677 aa18.04■□□□□ 0.48
GNE-202ENST00000396594 KIF5CO60282 957 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 METAP2P50579 478 aaKnown RBP eCLIP18.03■□□□□ 0.48
GNE-202ENST00000396594 ATP2B3Q16720 1220 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 MATR3P43243 847 aaKnown RBP eCLIP18.03■□□□□ 0.48
GNE-202ENST00000396594 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
GNE-202ENST00000396594 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 SH2D4AQ9H788 454 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 NAA15Q9BXJ9 866 aaKnown RBP18.03■□□□□ 0.48
GNE-202ENST00000396594 CFAP100Q494V2 611 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
GNE-202ENST00000396594 KIF4AO95239 1232 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms