RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
TRIM40-207ENST00000396581 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
TRIM40-207ENST00000396581 SRGAP3O43295 1099 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
TRIM40-207ENST00000396581 LARGE1O95461 756 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 MAP4K4O95819 1239 aaPredicted RBP15.92■□□□□ 0.14
TRIM40-207ENST00000396581 TPM3P06753 285 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 WDR17Q8IZU2 1322 aa15.92■□□□□ 0.14
TRIM40-207ENST00000396581 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
TRIM40-207ENST00000396581 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
TRIM40-207ENST00000396581 CASTP20810 708 aaKnown RBP15.91■□□□□ 0.14
TRIM40-207ENST00000396581 GJB2P29033 226 aa15.91■□□□□ 0.14
TRIM40-207ENST00000396581 ST3GAL1Q11201 340 aa15.91■□□□□ 0.14
TRIM40-207ENST00000396581 DNTTIP2Q5QJE6 756 aaKnown RBP15.91■□□□□ 0.14
TRIM40-207ENST00000396581 KIAA1524Q8TCG1 905 aa15.91■□□□□ 0.14
TRIM40-207ENST00000396581 RUFY2Q8WXA3 655 aa15.91■□□□□ 0.14
TRIM40-207ENST00000396581 AP5Z1O43299 807 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 FIBPO43427 364 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 NBPF7P0C2Y1 421 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-207ENST00000396581 TEFQ10587 303 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 CWC27Q6UX04 472 aaKnown RBP15.9■□□□□ 0.14
TRIM40-207ENST00000396581 SPG7Q9UQ90 795 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 MEGF6O75095 1541 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 COL5A2P05997 1499 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-207ENST00000396581 DNM1Q05193 864 aaKnown RBP15.9■□□□□ 0.14
TRIM40-207ENST00000396581 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 GIMAP6Q6P9H5 292 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
TRIM40-207ENST00000396581 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-207ENST00000396581 KDM3BQ7LBC6 1761 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 CCDC171Q6TFL3 1326 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 SNRKQ9NRH2 765 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 PDRG1Q9NUG6 133 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 ELP1O95163 1332 aa15.89■□□□□ 0.13
TRIM40-207ENST00000396581 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
TRIM40-207ENST00000396581 PTH1RQ03431 593 aa15.88■□□□□ 0.13
TRIM40-207ENST00000396581 ADCK5Q3MIX3 580 aa15.88■□□□□ 0.13
TRIM40-207ENST00000396581 DNAAF4Q8WXU2 420 aa15.88■□□□□ 0.13
TRIM40-207ENST00000396581 KCNF1Q9H3M0 494 aa15.88■□□□□ 0.13
TRIM40-207ENST00000396581 CCDC83Q8IWF9 413 aa15.88■□□□□ 0.13
TRIM40-207ENST00000396581 ADAMTS7Q9UKP4 1686 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 CCDC192P0DO97 292 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 CPA1P15085 419 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 PHKG2P15735 406 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 LARP6Q9BRS8 491 aaKnown RBP15.87■□□□□ 0.13
TRIM40-207ENST00000396581 DIAPH3Q9NSV4 1193 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 CYP46A1Q9Y6A2 500 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 TOM1L2Q6ZVM7 507 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 C17orf53Q8N3J3 647 aaPredicted RBP15.87■□□□□ 0.13
TRIM40-207ENST00000396581 MPNDQ8N594 471 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 JAKMIP1Q96N16 626 aaKnown RBP15.87■□□□□ 0.13
TRIM40-207ENST00000396581 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 ECHDC1Q9NTX5 307 aa15.87■□□□□ 0.13
TRIM40-207ENST00000396581 ADCY9O60503 1353 aa15.86■□□□□ 0.13
TRIM40-207ENST00000396581 ME3Q16798 604 aa15.86■□□□□ 0.13
TRIM40-207ENST00000396581 ALDH8A1Q9H2A2 487 aaPredicted RBP15.86■□□□□ 0.13
TRIM40-207ENST00000396581 CYP27B1O15528 508 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
TRIM40-207ENST00000396581 CLASRPQ8N2M8 674 aaKnown RBP15.85■□□□□ 0.13
TRIM40-207ENST00000396581 FAM200AQ8TCP9 573 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 EVI5LQ96CN4 794 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
TRIM40-207ENST00000396581 MAP4K1Q92918 833 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 PYCARDQ9ULZ3 195 aa15.85■□□□□ 0.13
TRIM40-207ENST00000396581 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 KCNQ3O43525 872 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
TRIM40-207ENST00000396581 RBM43Q6ZSC3 357 aaKnown RBP15.84■□□□□ 0.13
TRIM40-207ENST00000396581 TTC6Q86TZ1 520 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 CHPF2Q9P2E5 772 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
TRIM40-207ENST00000396581 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
TRIM40-207ENST00000396581 ALDH1L1O75891 902 aa15.83■□□□□ 0.13
TRIM40-207ENST00000396581 KRT85P78386 507 aa15.83■□□□□ 0.13
TRIM40-207ENST00000396581 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.13
TRIM40-207ENST00000396581 HIP1O00291 1037 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 CTIFO43310 598 aaKnown RBP15.83■□□□□ 0.12
TRIM40-207ENST00000396581 TOM1O60784 492 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 EVA1CP58658 441 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 LARP1Q6PKG0 1096 aaKnown RBP15.83■□□□□ 0.12
TRIM40-207ENST00000396581 GPATCH3Q96I76 525 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 MRVI1Q9Y6F6 885 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 PKD1L3Q7Z443 1732 aa15.83■□□□□ 0.12
TRIM40-207ENST00000396581 JCADQ9P266 1359 aa15.82■□□□□ 0.12
TRIM40-207ENST00000396581 ZKSCAN1P17029 563 aaPredicted RBP15.82■□□□□ 0.12
TRIM40-207ENST00000396581 PDCP20941 246 aa15.82■□□□□ 0.12
TRIM40-207ENST00000396581 MAP3K11Q16584 847 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms