RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 DDNO94850 711 aaPredicted RBP22.4■■□□□ 1.18
TNFSF13-205ENST00000396545 RIPK4P57078 832 aa22.4■■□□□ 1.18
TNFSF13-205ENST00000396545 RRP7AQ9Y3A4 280 aaKnown RBP22.4■■□□□ 1.18
TNFSF13-205ENST00000396545 IL16Q14005 1332 aa22.4■■□□□ 1.18
TNFSF13-205ENST00000396545 ABCC12Q96J65 1359 aa22.39■■□□□ 1.18
TNFSF13-205ENST00000396545 CRY2Q49AN0 593 aa22.39■■□□□ 1.18
TNFSF13-205ENST00000396545 OLFM4Q6UX06 510 aa22.39■■□□□ 1.18
TNFSF13-205ENST00000396545 TTLL7Q6ZT98 887 aa22.39■■□□□ 1.18
TNFSF13-205ENST00000396545 GTF2E1P29083 439 aaPredicted RBP22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 FKBP4Q02790 459 aaKnown RBP eCLIP22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 B4GALNT3Q6L9W6 998 aa22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 KIF6Q6ZMV9 814 aa22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 NYXQ9GZU5 481 aa22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 ALDH1B1P30837 517 aa22.38■■□□□ 1.17
TNFSF13-205ENST00000396545 MYL6BP14649 208 aa22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 NUTM1Q86Y26 1132 aa22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 RTKN2Q8IZC4 609 aa22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 L3MBTL3Q96JM7 780 aaPredicted RBP22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 ZNF277Q9NRM2 450 aaPredicted RBP22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 RIC1Q4ADV7 1423 aa22.37■■□□□ 1.17
TNFSF13-205ENST00000396545 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 SNED1Q8TER0 1413 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 TSHZ2Q9NRE2 1034 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 TRIM35Q9UPQ4 493 aa22.36■■□□□ 1.17
TNFSF13-205ENST00000396545 ZBTB3Q9H5J0 574 aa22.35■■□□□ 1.17
TNFSF13-205ENST00000396545 POTEIP0CG38 1075 aa22.34■■□□□ 1.17
TNFSF13-205ENST00000396545 POTEJP0CG39 1038 aa22.34■■□□□ 1.17
TNFSF13-205ENST00000396545 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
TNFSF13-205ENST00000396545 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
TNFSF13-205ENST00000396545 IQCA1LA6NCM1 817 aa22.33■■□□□ 1.17
TNFSF13-205ENST00000396545 GPTP24298 496 aa22.33■■□□□ 1.17
TNFSF13-205ENST00000396545 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.17
TNFSF13-205ENST00000396545 SCN4AP35499 1836 aa22.33■■□□□ 1.17
TNFSF13-205ENST00000396545 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
TNFSF13-205ENST00000396545 ZNF34Q8IZ26 560 aa22.33■■□□□ 1.16
TNFSF13-205ENST00000396545 SUSD4Q5VX71 490 aa22.32■■□□□ 1.16
TNFSF13-205ENST00000396545 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
TNFSF13-205ENST00000396545 EXOC6Q8TAG9 804 aa22.32■■□□□ 1.16
TNFSF13-205ENST00000396545 NTSR2O95665 410 aa22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 HOXA10P31260 410 aaPredicted RBP22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 PDIA6Q15084 440 aa22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 PSMD1Q99460 953 aa22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 TAF1DQ9H5J8 278 aaPredicted RBP22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 BABAM1Q9NWV8 329 aa22.31■■□□□ 1.16
TNFSF13-205ENST00000396545 PLIN1O60240 522 aa22.3■■□□□ 1.16
TNFSF13-205ENST00000396545 IARSP41252 1262 aaKnown RBP22.3■■□□□ 1.16
TNFSF13-205ENST00000396545 SYNE4Q8N205 404 aa22.3■■□□□ 1.16
TNFSF13-205ENST00000396545 FZD9O00144 591 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 LDHDQ86WU2 507 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 RPGRQ92834 1020 aaKnown RBP22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 CCDC136Q96JN2 1154 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 CREBZFQ9NS37 354 aa22.29■■□□□ 1.16
TNFSF13-205ENST00000396545 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.16
TNFSF13-205ENST00000396545 PARP10Q53GL7 1025 aa22.27■■□□□ 1.16
TNFSF13-205ENST00000396545 COL13A1Q5TAT6 717 aaPredicted RBP22.27■■□□□ 1.16
TNFSF13-205ENST00000396545 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
TNFSF13-205ENST00000396545 CRAMP1Q96RY5 1269 aa22.27■■□□□ 1.16
TNFSF13-205ENST00000396545 COL4A5P29400 1685 aa22.26■■□□□ 1.15
TNFSF13-205ENST00000396545 PASKQ96RG2 1323 aa22.26■■□□□ 1.15
TNFSF13-205ENST00000396545 PPP1R42Q7Z4L9 355 aa22.26■■□□□ 1.15
TNFSF13-205ENST00000396545 HACL1Q9UJ83 578 aa22.26■■□□□ 1.15
TNFSF13-205ENST00000396545 ADAMTSL1Q8N6G6 1762 aa22.26■■□□□ 1.15
TNFSF13-205ENST00000396545 ANXA1P04083 346 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 RBM17Q96I25 401 aaKnown RBP22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 GNAI1P63096 354 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 GPC2Q8N158 579 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 CRBNQ96SW2 442 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 IFT57Q9NWB7 429 aa22.25■■□□□ 1.15
TNFSF13-205ENST00000396545 EPHX2P34913 555 aa22.24■■□□□ 1.15
TNFSF13-205ENST00000396545 PPEF1O14829 653 aaPredicted RBP22.23■■□□□ 1.15
TNFSF13-205ENST00000396545 HSPA1AP0DMV8 641 aaKnown RBP22.23■■□□□ 1.15
TNFSF13-205ENST00000396545 HSPA1BP0DMV9 641 aaKnown RBP22.23■■□□□ 1.15
TNFSF13-205ENST00000396545 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
TNFSF13-205ENST00000396545 UTP14AQ9BVJ6 771 aaKnown RBP22.23■■□□□ 1.15
TNFSF13-205ENST00000396545 ITGBL1O95965 494 aaPredicted RBP22.22■■□□□ 1.15
TNFSF13-205ENST00000396545 EAPPQ56P03 285 aaPredicted RBP22.22■■□□□ 1.15
TNFSF13-205ENST00000396545 C20orf194Q5TEA3 1177 aa22.22■■□□□ 1.15
TNFSF13-205ENST00000396545 NLRP3Q96P20 1036 aa22.22■■□□□ 1.15
TNFSF13-205ENST00000396545 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
TNFSF13-205ENST00000396545 CHL1O00533 1208 aa22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 COPS6Q7L5N1 327 aa22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 XAGE3Q8WTP9 111 aa22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 NECTIN2Q92692 538 aa22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 CFAP44Q96MT7 982 aa22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 MKRN1Q9UHC7 482 aaKnown RBP22.21■■□□□ 1.15
TNFSF13-205ENST00000396545 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
TNFSF13-205ENST00000396545 BCAR3O75815 825 aa22.2■■□□□ 1.14
TNFSF13-205ENST00000396545 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms