RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■□□□□ 8.6
THUMPD1-202ENST00000396083 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 COL24A1Q17RW2 1714 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 NTSR2O95665 410 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 IGKV5-2P06315 115 aa12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
THUMPD1-202ENST00000396083 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 HSP90AB3PQ58FF7 597 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
THUMPD1-202ENST00000396083 H0YIN7 160 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 KCNA3P22001 575 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 UBE3BQ7Z3V4 1068 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 BRIP1Q9BX63 1249 aa12.85□□□□□ -0.35
THUMPD1-202ENST00000396083 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
THUMPD1-202ENST00000396083 TAF1P21675 1872 aa12.83□□□□□ -0.35
THUMPD1-202ENST00000396083 NEURL1BA8MQ27 555 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 PDE6BP35913 854 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 TGFB2P61812 414 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
THUMPD1-202ENST00000396083 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
THUMPD1-202ENST00000396083 SRGNP10124 158 aa12.82□□□□□ -0.36
THUMPD1-202ENST00000396083 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
THUMPD1-202ENST00000396083 C21orf2O43822 256 aa12.82□□□□□ -0.36
THUMPD1-202ENST00000396083 PLIN1O60240 522 aa12.82□□□□□ -0.36
THUMPD1-202ENST00000396083 TNRC6CQ9HCJ0 1690 aaKnown RBP12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 NRXN2Q9P2S2 1712 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 BEND3Q5T5X7 828 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
THUMPD1-202ENST00000396083 GCKRQ14397 625 aa12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 COL11A2P13942 1736 aaPredicted RBP12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
THUMPD1-202ENST00000396083 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
THUMPD1-202ENST00000396083 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
THUMPD1-202ENST00000396083 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
THUMPD1-202ENST00000396083 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
THUMPD1-202ENST00000396083 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
THUMPD1-202ENST00000396083 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
THUMPD1-202ENST00000396083 TRIM27P14373 513 aa12.78□□□□□ -0.36
THUMPD1-202ENST00000396083 RGL2O15211 777 aa12.78□□□□□ -0.36
THUMPD1-202ENST00000396083 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
THUMPD1-202ENST00000396083 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.36
THUMPD1-202ENST00000396083 RCAN3Q9UKA8 241 aa12.77□□□□□ -0.36
THUMPD1-202ENST00000396083 PTPRCP08575 1304 aa12.77□□□□□ -0.36
THUMPD1-202ENST00000396083 NPR1P16066 1061 aa12.77□□□□□ -0.37
THUMPD1-202ENST00000396083 RASSF7Q02833 373 aa12.77□□□□□ -0.37
THUMPD1-202ENST00000396083 PCNTO95613 3336 aa12.77□□□□□ -0.37
THUMPD1-202ENST00000396083 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 GRM8O00222 908 aa12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
THUMPD1-202ENST00000396083 ABCC4O15439 1325 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 GREM2Q9H772 168 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 RLBP1P12271 317 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 PANK1Q8TE04 598 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 H7C1W4 665 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 PDE8AO60658 829 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
THUMPD1-202ENST00000396083 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms