RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ADAM21Q9UKJ8 722 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 MYOM1P52179 1685 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 SCP2P22307 547 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 DRC7Q8IY82 874 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 NUDT16Q96DE0 195 aaKnown RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
CDRT1-204ENST00000395906 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
CDRT1-204ENST00000395906 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
CDRT1-204ENST00000395906 ERCC3P19447 782 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 MNAT1P51948 309 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 ARHGAP29Q52LW3 1261 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 STAG1Q8WVM7 1258 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 SLIT1O75093 1534 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 INHBEP58166 350 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 ZC3H12AQ5D1E8 599 aaKnown RBP11.37□□□□□ -0.59
CDRT1-204ENST00000395906 PSMD1Q99460 953 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 PRR36Q9H6K5 1346 aa11.37□□□□□ -0.59
CDRT1-204ENST00000395906 A0A087WUV0 522 aaPredicted RBP11.36□□□□□ -0.59
CDRT1-204ENST00000395906 CTAGE5O15320 804 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 SGSM2O43147 1006 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 TADA2BQ86TJ2 420 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 MIEF2Q96C03 454 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 FAXDC2Q96IV6 333 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 CASTP20810 708 aaKnown RBP11.36□□□□□ -0.59
CDRT1-204ENST00000395906 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 PDRG1Q9NUG6 133 aa11.36□□□□□ -0.59
CDRT1-204ENST00000395906 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 NEMFO60524 1076 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 JAKMIP3Q5VZ66 844 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 CACTINQ8WUQ7 758 aaKnown RBP11.35□□□□□ -0.59
CDRT1-204ENST00000395906 NRBP1Q9UHY1 535 aa11.35□□□□□ -0.59
CDRT1-204ENST00000395906 CCDC192P0DO97 292 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 UBE2HP62256 183 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 A1CFQ9NQ94 594 aaKnown RBP11.34□□□□□ -0.59
CDRT1-204ENST00000395906 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
CDRT1-204ENST00000395906 MED14O60244 1454 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
CDRT1-204ENST00000395906 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
CDRT1-204ENST00000395906 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
CDRT1-204ENST00000395906 USP27XA6NNY8 438 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 FYB1O15117 783 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 ZNF75DP51815 510 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
CDRT1-204ENST00000395906 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 FMNL3Q8IVF7 1028 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 ZNF513Q8N8E2 541 aaPredicted RBP11.33□□□□□ -0.6
CDRT1-204ENST00000395906 KCND1Q9NSA2 647 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 NEBLO76041 1014 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 TTC19Q6DKK2 380 aaPredicted RBP11.33□□□□□ -0.6
CDRT1-204ENST00000395906 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.6
CDRT1-204ENST00000395906 PAIP2Q9BPZ3 127 aaKnown RBP11.33□□□□□ -0.6
CDRT1-204ENST00000395906 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
CDRT1-204ENST00000395906 ANAPC15P60006 121 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 GBP6Q6ZN66 633 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 NME9Q86XW9 330 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 MICALL1Q8N3F8 863 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 UBXN4Q92575 508 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
CDRT1-204ENST00000395906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDRT1-204ENST00000395906 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 SASH3O75995 380 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 MCM2P49736 904 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 FOXR1Q6PIV2 292 aa11.32□□□□□ -0.6
CDRT1-204ENST00000395906 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 CDC25BP30305 580 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 MTHFSP49914 203 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 CUL4AQ13619 759 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 TRIM5Q9C035 493 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 ZBTB40Q9NUA8 1239 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 ETAA1Q9NY74 926 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
CDRT1-204ENST00000395906 ELF1P32519 619 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
CDRT1-204ENST00000395906 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms