RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 CMTR1Q8N1G2 835 aaKnown RBP7.99□□□□□ -1.13
TRPS1-202ENST00000395713 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
TRPS1-202ENST00000395713 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
TRPS1-202ENST00000395713 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
TRPS1-202ENST00000395713 ATXN7O15265 892 aaPredicted RBP7.98□□□□□ -1.13
TRPS1-202ENST00000395713 PCSK2P16519 638 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 ITGA6P23229 1130 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 GRNP28799 593 aaKnown RBP7.98□□□□□ -1.13
TRPS1-202ENST00000395713 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 NPAS4Q8IUM7 802 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 GJD3Q8N144 294 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 FAM129BQ96TA1 746 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 BRD7Q9NPI1 651 aa7.98□□□□□ -1.13
TRPS1-202ENST00000395713 A6NHS1 94 aa7.97□□□□□ -1.13
TRPS1-202ENST00000395713 KHNYNO15037 678 aaKnown RBP7.97□□□□□ -1.13
TRPS1-202ENST00000395713 PPFIA3O75145 1194 aa7.97□□□□□ -1.13
TRPS1-202ENST00000395713 USP5P45974 858 aa7.97□□□□□ -1.13
TRPS1-202ENST00000395713 PCDHGC4Q9Y5F7 938 aa7.97□□□□□ -1.13
TRPS1-202ENST00000395713 KCNMB2Q9Y691 235 aa7.97□□□□□ -1.13
TRPS1-202ENST00000395713 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.14
TRPS1-202ENST00000395713 GPR182O15218 404 aa7.96□□□□□ -1.14
TRPS1-202ENST00000395713 IGHA2P01877 340 aa7.96□□□□□ -1.14
TRPS1-202ENST00000395713 SFSWAPQ12872 951 aaKnown RBP7.96□□□□□ -1.14
TRPS1-202ENST00000395713 PDE3BQ13370 1112 aa7.96□□□□□ -1.14
TRPS1-202ENST00000395713 TTC16Q8NEE8 873 aa7.96□□□□□ -1.14
TRPS1-202ENST00000395713 ZNF837Q96EG3 531 aaPredicted RBP7.96□□□□□ -1.14
TRPS1-202ENST00000395713 BNIP3LO60238 219 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 RPLP1P05386 114 aaKnown RBP7.95□□□□□ -1.14
TRPS1-202ENST00000395713 FAM157BP0CG42 384 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 EPB42P16452 691 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 TNP2Q05952 138 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 TRIP4Q15650 581 aaPredicted RBP7.95□□□□□ -1.14
TRPS1-202ENST00000395713 GTPBP3Q969Y2 492 aaKnown RBP7.95□□□□□ -1.14
TRPS1-202ENST00000395713 GMCL1Q96IK5 515 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 DMRTB1Q96MA1 342 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 NIF3L1Q9GZT8 377 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 KCNH4Q9UQ05 1017 aa7.95□□□□□ -1.14
TRPS1-202ENST00000395713 CDC14CA4D256 554 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 UBAP1LF5GYI3 381 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 TREHO43280 583 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 EFSO43281 561 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 MAPTP10636 758 aaKnown RBP7.94□□□□□ -1.14
TRPS1-202ENST00000395713 PLCB3Q01970 1234 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 DSC3Q14574 896 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 ZNF428Q96B54 188 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 STRN4Q9NRL3 753 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 NDFIP2Q9NV92 336 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 HCN2Q9UL51 889 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 FNDC3AQ9Y2H6 1198 aaKnown RBP7.94□□□□□ -1.14
TRPS1-202ENST00000395713 AMOTL2Q9Y2J4 779 aa7.94□□□□□ -1.14
TRPS1-202ENST00000395713 NACADO15069 1562 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 KCNQ4P56696 695 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 EHHADHQ08426 723 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 VWA5B2Q8N398 1253 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 ABHD17AQ96GS6 310 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 BCL2L13Q9BXK5 485 aa7.93□□□□□ -1.14
TRPS1-202ENST00000395713 GPR25O00155 361 aa7.92□□□□□ -1.14
TRPS1-202ENST00000395713 XYLBO75191 536 aa7.92□□□□□ -1.14
TRPS1-202ENST00000395713 P4HBP07237 508 aaKnown RBP7.92□□□□□ -1.14
TRPS1-202ENST00000395713 FMR1Q06787 632 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRPS1-202ENST00000395713 GRIN2CQ14957 1233 aa7.92□□□□□ -1.14
TRPS1-202ENST00000395713 ALKBH8Q96BT7 664 aaKnown RBP7.92□□□□□ -1.14
TRPS1-202ENST00000395713 EGFRP00533 1210 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 MAPK8P45983 427 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 VEGFBP49765 207 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 TAGLNQ01995 201 aaKnown RBP7.91□□□□□ -1.14
TRPS1-202ENST00000395713 LAMC2Q13753 1193 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 COL19A1Q14993 1142 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
TRPS1-202ENST00000395713 XKR5Q6UX68 686 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 ZNF438Q7Z4V0 828 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 FBXO33Q7Z6M2 555 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 MARK1Q9P0L2 795 aa7.91□□□□□ -1.14
TRPS1-202ENST00000395713 RBM47A0AV96 593 aaKnown RBP7.9□□□□□ -1.14
TRPS1-202ENST00000395713 SASH3O75995 380 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 CD33P20138 364 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 RBM25P49756 843 aaKnown RBP7.9□□□□□ -1.14
TRPS1-202ENST00000395713 ORC1Q13415 861 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 CCINQ13939 588 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 KRT25Q7Z3Z0 450 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 NPM2Q86SE8 214 aaKnown RBP7.9□□□□□ -1.14
TRPS1-202ENST00000395713 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 CFHR5Q9BXR6 569 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 GSX2Q9BZM3 304 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 C11orf16Q9NQ32 467 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 TMEM63CQ9P1W3 806 aa7.9□□□□□ -1.14
TRPS1-202ENST00000395713 FOXD3Q9UJU5 478 aaPredicted RBP7.9□□□□□ -1.14
TRPS1-202ENST00000395713 ATXN7L1Q9ULK2 861 aaPredicted RBP7.9□□□□□ -1.14
TRPS1-202ENST00000395713 PDE12Q6L8Q7 609 aaKnown RBP7.89□□□□□ -1.15
TRPS1-202ENST00000395713 NANOS1Q8WY41 292 aaKnown RBP7.89□□□□□ -1.15
TRPS1-202ENST00000395713 NXF1Q9UBU9 619 aaKnown RBP7.89□□□□□ -1.15
TRPS1-202ENST00000395713 PHF24Q9UPV7 400 aa7.89□□□□□ -1.15
TRPS1-202ENST00000395713 TNFRSF21O75509 655 aa7.88□□□□□ -1.15
TRPS1-202ENST00000395713 ZNF16P17020 682 aaPredicted RBP7.88□□□□□ -1.15
TRPS1-202ENST00000395713 FGFR3P22607 806 aa7.88□□□□□ -1.15
TRPS1-202ENST00000395713 TARSP26639 723 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms