RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 ME1P48163 572 aa17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
PPP1CB-203ENST00000395366 KLHL34Q8N239 644 aa17.33■□□□□ 0.37
PPP1CB-203ENST00000395366 CDKL5O76039 1030 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 NAPBQ9H115 298 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 CFAP45Q9UL16 551 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
PPP1CB-203ENST00000395366 ZNF213O14771 459 aa17.32■□□□□ 0.36
PPP1CB-203ENST00000395366 PTPRMP28827 1452 aa17.32■□□□□ 0.36
PPP1CB-203ENST00000395366 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
PPP1CB-203ENST00000395366 RBM25P49756 843 aaKnown RBP17.32■□□□□ 0.36
PPP1CB-203ENST00000395366 PHKG2P15735 406 aa17.32■□□□□ 0.36
PPP1CB-203ENST00000395366 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 TFCP2Q12800 502 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 CDC5LQ99459 802 aaKnown RBP17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 NAT10Q9H0A0 1025 aaKnown RBP17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 POLR1AO95602 1720 aaPredicted RBP17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 AGLP35573 1532 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 A1BGP04217 495 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
PPP1CB-203ENST00000395366 LMTK3Q96Q04 1460 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 TPM3P06753 285 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 MED14O60244 1454 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 NRXN1Q9ULB1 1477 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 SYCE3A1L190 88 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
PPP1CB-203ENST00000395366 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 CLSTN1O94985 981 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 GJB2P29033 226 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 STX6O43752 255 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 HAND2P61296 217 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 GCKRQ14397 625 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 TRIM5Q9C035 493 aa17.29■□□□□ 0.36
PPP1CB-203ENST00000395366 IQGAP1P46940 1657 aa17.28■□□□□ 0.36
PPP1CB-203ENST00000395366 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
PPP1CB-203ENST00000395366 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
PPP1CB-203ENST00000395366 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
PPP1CB-203ENST00000395366 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
PPP1CB-203ENST00000395366 CCT2P78371 535 aaKnown RBP17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 PAG1Q9NWQ8 432 aa17.27■□□□□ 0.36
PPP1CB-203ENST00000395366 HMGN5P82970 282 aaKnown RBP17.27■□□□□ 0.35
PPP1CB-203ENST00000395366 OLFM4Q6UX06 510 aa17.27■□□□□ 0.35
PPP1CB-203ENST00000395366 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 SCAND2PQ9GZW5 306 aaPredicted RBP17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 TPM1P09493 284 aa17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
PPP1CB-203ENST00000395366 ERBB3P21860 1342 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 AOX1Q06278 1338 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 BRF1Q92994 677 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.351e-8■□□□□ 10.9
PPP1CB-203ENST00000395366 ERVV-2B6SEH9 535 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 GUCY1B3Q02153 619 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 AK7Q96M32 723 aa17.25■□□□□ 0.35
PPP1CB-203ENST00000395366 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
PPP1CB-203ENST00000395366 ADGRB1O14514 1584 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms