RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 PTPRCP08575 1304 aa10.78□□□□□ -0.68
HERC4-203ENST00000395185 MS4A1P11836 297 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
HERC4-203ENST00000395185 CNBD1Q8NA66 436 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 NYXQ9GZU5 481 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 TNNQ9UQP3 1299 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
HERC4-203ENST00000395185 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 HSP90AB3PQ58FF7 597 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 INTS3Q68E01 1043 aaKnown RBP10.76□□□□□ -0.69
HERC4-203ENST00000395185 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 C2CD5Q86YS7 1000 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 DZIP1LQ8IYY4 767 aaKnown RBP10.76□□□□□ -0.69
HERC4-203ENST00000395185 STK31Q9BXU1 1019 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 API5Q9BZZ5 524 aaKnown RBP10.76□□□□□ -0.69
HERC4-203ENST00000395185 HYPKQ9NX55 129 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 ABCC4O15439 1325 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 MAP3K15Q6ZN16 1313 aa10.76□□□□□ -0.69
HERC4-203ENST00000395185 UBR2Q8IWV8 1755 aa10.75□□□□□ -0.69
HERC4-203ENST00000395185 YBX3P16989 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
HERC4-203ENST00000395185 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
HERC4-203ENST00000395185 FLIIQ13045 1269 aa10.75□□□□□ -0.69
HERC4-203ENST00000395185 ARHGAP27Q6ZUM4 889 aa10.75□□□□□ -0.69
HERC4-203ENST00000395185 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
HERC4-203ENST00000395185 FRAT1Q92837 279 aaPredicted RBP10.75□□□□□ -0.69
HERC4-203ENST00000395185 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
HERC4-203ENST00000395185 CARMIL3Q8ND23 1372 aa10.75□□□□□ -0.69
HERC4-203ENST00000395185 VIRMAQ69YN4 1812 aaKnown RBP10.74□□□□□ -0.69
HERC4-203ENST00000395185 FAM177BA6PVY3 158 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 AAMPQ13685 434 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 HLFQ16534 295 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 TTLL7Q6ZT98 887 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 ANKRD13DQ6ZTN6 518 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 TTLL6Q8N841 843 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 XAGE3Q8WTP9 111 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 ZBTB3Q9H5J0 574 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 PHAXQ9H814 394 aaKnown RBP10.74□□□□□ -0.69
HERC4-203ENST00000395185 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
HERC4-203ENST00000395185 IBTKQ9P2D0 1353 aaPredicted RBP10.74□□□□□ -0.69
HERC4-203ENST00000395185 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 DDX58O95786 925 aaKnown RBP10.73□□□□□ -0.69
HERC4-203ENST00000395185 NEFLP07196 543 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 CHRNA5P30532 468 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 PARP10Q53GL7 1025 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 PRR5LQ6MZQ0 368 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
HERC4-203ENST00000395185 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
HERC4-203ENST00000395185 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
HERC4-203ENST00000395185 ANXA1P04083 346 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
HERC4-203ENST00000395185 KCNA3P22001 575 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 IRX6P78412 446 aaPredicted RBP10.72□□□□□ -0.69
HERC4-203ENST00000395185 MVPQ14764 893 aaKnown RBP10.72□□□□□ -0.69
HERC4-203ENST00000395185 KSR2Q6VAB6 950 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 RIC3Q7Z5B4 369 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 TMEM57Q8N5G2 664 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
HERC4-203ENST00000395185 UTP14AQ9BVJ6 771 aaKnown RBP10.72□□□□□ -0.69
HERC4-203ENST00000395185 ADCY9O60503 1353 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 GPTP24298 496 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 ALDH1B1P30837 517 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 TCIRG1Q13488 830 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 C10orf71Q711Q0 1435 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 TAF1LQ8IZX4 1826 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 PLBD2Q8NHP8 589 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 CLUAP1Q96AJ1 413 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
HERC4-203ENST00000395185 ZBTB40Q9NUA8 1239 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
HERC4-203ENST00000395185 CACNA1FO60840 1977 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 UBR3Q6ZT12 1888 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 CICQ96RK0 1608 aaPredicted RBP10.7□□□□□ -0.7
HERC4-203ENST00000395185 PI4KAP2A4QPH2 592 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 F6X3S4 739 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 HSP90B1P14625 803 aaKnown RBP10.7□□□□□ -0.7
HERC4-203ENST00000395185 NPR1P16066 1061 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 EVX2Q03828 476 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 BEND3Q5T5X7 828 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 SOGA3Q5TF21 947 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 STYK1Q6J9G0 422 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 PI4KAP1Q8N8J0 262 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 PPP4R2Q9NY27 417 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 DDX19BQ9UMR2 479 aa10.7□□□□□ -0.7
HERC4-203ENST00000395185 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
HERC4-203ENST00000395185 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
HERC4-203ENST00000395185 SUSD4Q5VX71 490 aa10.69□□□□□ -0.7
HERC4-203ENST00000395185 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
HERC4-203ENST00000395185 RPGRQ92834 1020 aaKnown RBP10.69□□□□□ -0.7
HERC4-203ENST00000395185 TRMT112Q9UI30 125 aaKnown RBP10.69□□□□□ -0.7
HERC4-203ENST00000395185 ATP10DQ9P241 1426 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms