RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 CCDC93Q567U6 631 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 OLFM4Q6UX06 510 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 PPP1R42Q7Z4L9 355 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 ALDH1B1P30837 517 aa29.88■■■□□ 2.37
PMS2P3-201ENST00000394921 C3orf67Q6ZVT6 689 aa29.88■■■□□ 2.37
PMS2P3-201ENST00000394921 HOXA10P31260 410 aaPredicted RBP29.87■■■□□ 2.37
PMS2P3-201ENST00000394921 HSP90AB3PQ58FF7 597 aa29.87■■■□□ 2.37
PMS2P3-201ENST00000394921 ANP32CO43423 234 aa29.86■■■□□ 2.37
PMS2P3-201ENST00000394921 TCIRG1Q13488 830 aa29.86■■■□□ 2.37
PMS2P3-201ENST00000394921 NLRP10Q86W26 655 aa29.86■■■□□ 2.37
PMS2P3-201ENST00000394921 UTP14AQ9BVJ6 771 aaKnown RBP29.86■■■□□ 2.37
PMS2P3-201ENST00000394921 DBF4Q9UBU7 674 aaPredicted RBP29.86■■■□□ 2.37
PMS2P3-201ENST00000394921 SNED1Q8TER0 1413 aa29.85■■■□□ 2.37
PMS2P3-201ENST00000394921 SLC10A5Q5PT55 438 aa29.85■■■□□ 2.37
PMS2P3-201ENST00000394921 RBM46Q8TBY0 533 aaKnown RBP29.84■■■□□ 2.37
PMS2P3-201ENST00000394921 MRS2Q9HD23 443 aa29.84■■■□□ 2.37
PMS2P3-201ENST00000394921 FKBP4Q02790 459 aaKnown RBP eCLIP29.83■■■□□ 2.37
PMS2P3-201ENST00000394921 RPGRQ92834 1020 aaKnown RBP29.83■■■□□ 2.37
PMS2P3-201ENST00000394921 PLBD2Q8NHP8 589 aa29.82■■■□□ 2.36
PMS2P3-201ENST00000394921 HYPKQ9NX55 129 aa29.82■■■□□ 2.36
PMS2P3-201ENST00000394921 RNF123Q5XPI4 1314 aa29.82■■■□□ 2.36
PMS2P3-201ENST00000394921 CCDC27Q2M243 656 aa29.81■■■□□ 2.36
PMS2P3-201ENST00000394921 C16orf71Q8IYS4 520 aaPredicted RBP29.81■■■□□ 2.36
PMS2P3-201ENST00000394921 RTKN2Q8IZC4 609 aa29.81■■■□□ 2.36
PMS2P3-201ENST00000394921 C8orf58Q8NAV2 365 aa29.81■■■□□ 2.36
PMS2P3-201ENST00000394921 WDR90Q96KV7 1748 aa29.81■■■□□ 2.36
PMS2P3-201ENST00000394921 LAMB2P55268 1798 aa29.8■■■□□ 2.36
PMS2P3-201ENST00000394921 ELL2O00472 640 aaPredicted RBP29.8■■■□□ 2.36
PMS2P3-201ENST00000394921 ANKRD13DQ6ZTN6 518 aa29.8■■■□□ 2.36
PMS2P3-201ENST00000394921 NLRP3Q96P20 1036 aa29.8■■■□□ 2.36
PMS2P3-201ENST00000394921 CRAMP1Q96RY5 1269 aa29.8■■■□□ 2.36
PMS2P3-201ENST00000394921 POTECB2RU33 542 aa29.79■■■□□ 2.36
PMS2P3-201ENST00000394921 SYNE4Q8N205 404 aa29.79■■■□□ 2.36
PMS2P3-201ENST00000394921 RBM17Q96I25 401 aaKnown RBP29.79■■■□□ 2.36
PMS2P3-201ENST00000394921 ZNF277Q9NRM2 450 aaPredicted RBP29.79■■■□□ 2.36
PMS2P3-201ENST00000394921 VEGFAP15692 232 aaPredicted RBP29.78■■■□□ 2.36
PMS2P3-201ENST00000394921 SLC51AQ86UW1 340 aa29.78■■■□□ 2.36
PMS2P3-201ENST00000394921 WWC1Q8IX03 1113 aa29.78■■■□□ 2.36
PMS2P3-201ENST00000394921 ISCA1Q9BUE6 129 aa29.78■■■□□ 2.36
PMS2P3-201ENST00000394921 DPY19L2Q6NUT2 758 aa29.77■■■□□ 2.36
PMS2P3-201ENST00000394921 TRMT112Q9UI30 125 aaKnown RBP29.76■■■□□ 2.36
PMS2P3-201ENST00000394921 HCLS1P14317 486 aaPredicted RBP29.75■■■□□ 2.35
PMS2P3-201ENST00000394921 CC2D2BQ6DHV5 1058 aa29.75■■■□□ 2.35
PMS2P3-201ENST00000394921 SH3TC1Q8TE82 1336 aa29.75■■■□□ 2.35
PMS2P3-201ENST00000394921 FSTL1Q12841 308 aa29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 NCBP3Q53F19 620 aaKnown RBP29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 TSPYL6Q8N831 410 aa29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 TSR2Q969E8 191 aaKnown RBP29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 PSMD1Q99460 953 aa29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 PHAXQ9H814 394 aaKnown RBP29.74■■■□□ 2.35
PMS2P3-201ENST00000394921 ZNF428Q96B54 188 aa29.73■■■□□ 2.35
PMS2P3-201ENST00000394921 DDX60Q8IY21 1712 aaKnown RBP29.73■■■□□ 2.35
PMS2P3-201ENST00000394921 ATP5J2-PTCD1G3V325 749 aa29.72■■■□□ 2.35
PMS2P3-201ENST00000394921 PPEF1O14829 653 aaPredicted RBP29.72■■■□□ 2.35
PMS2P3-201ENST00000394921 DDNO94850 711 aaPredicted RBP29.72■■■□□ 2.35
PMS2P3-201ENST00000394921 IARSP41252 1262 aaKnown RBP29.72■■■□□ 2.35
PMS2P3-201ENST00000394921 ABCC4O15439 1325 aa29.72■■■□□ 2.35
PMS2P3-201ENST00000394921 APLP1P51693 650 aa29.71■■■□□ 2.35
PMS2P3-201ENST00000394921 TRIM28Q13263 835 aaKnown RBP29.71■■■□□ 2.35
PMS2P3-201ENST00000394921 TCERG1O14776 1098 aaKnown RBP29.7■■■□□ 2.34
PMS2P3-201ENST00000394921 IL16Q14005 1332 aa29.7■■■□□ 2.34
PMS2P3-201ENST00000394921 ZNF541Q9H0D2 1346 aa29.7■■■□□ 2.34
PMS2P3-201ENST00000394921 COL4A5P29400 1685 aa29.69■■■□□ 2.34
PMS2P3-201ENST00000394921 GOLGA2Q08379 1002 aa29.69■■■□□ 2.34
PMS2P3-201ENST00000394921 CCDC30Q5VVM6 783 aa29.69■■■□□ 2.34
PMS2P3-201ENST00000394921 SMC1BQ8NDV3 1235 aa29.69■■■□□ 2.34
PMS2P3-201ENST00000394921 TAF1P21675 1872 aa29.68■■■□□ 2.34
PMS2P3-201ENST00000394921 GRIPAP1Q4V328 841 aa29.68■■■□□ 2.34
PMS2P3-201ENST00000394921 RIC3Q7Z5B4 369 aa29.68■■■□□ 2.34
PMS2P3-201ENST00000394921 FAM89AQ96GI7 184 aa29.68■■■□□ 2.34
PMS2P3-201ENST00000394921 ATP6V0A2Q9Y487 856 aa29.68■■■□□ 2.34
PMS2P3-201ENST00000394921 FZD9O00144 591 aa29.66■■■□□ 2.34
PMS2P3-201ENST00000394921 L3MBTL3Q96JM7 780 aaPredicted RBP29.66■■■□□ 2.34
PMS2P3-201ENST00000394921 CHMP4AQ9BY43 222 aa29.66■■■□□ 2.34
PMS2P3-201ENST00000394921 BBOX1O75936 387 aa29.64■■■□□ 2.34
PMS2P3-201ENST00000394921 DDX46Q7L014 1031 aaKnown RBP29.64■■■□□ 2.34
PMS2P3-201ENST00000394921 SCN4AP35499 1836 aa29.63■■■□□ 2.33
PMS2P3-201ENST00000394921 GRAPQ13588 217 aa29.63■■■□□ 2.33
PMS2P3-201ENST00000394921 GRAPLQ8TC17 118 aaPredicted RBP29.63■■■□□ 2.33
PMS2P3-201ENST00000394921 MYD88Q99836 296 aa29.63■■■□□ 2.33
PMS2P3-201ENST00000394921 SALL2Q9Y467 1007 aaPredicted RBP29.63■■■□□ 2.33
PMS2P3-201ENST00000394921 SF3B3Q15393 1217 aaKnown RBP29.62■■■□□ 2.33
PMS2P3-201ENST00000394921 TWISTNBQ3B726 338 aaPredicted RBP29.62■■■□□ 2.33
PMS2P3-201ENST00000394921 RTL5Q5HYW3 569 aaPredicted RBP29.62■■■□□ 2.33
PMS2P3-201ENST00000394921 WDR63Q8IWG1 891 aa29.61■■■□□ 2.33
PMS2P3-201ENST00000394921 SP8Q8IXZ3 490 aa29.61■■■□□ 2.33
PMS2P3-201ENST00000394921 DNAJC5GQ8N7S2 189 aa29.61■■■□□ 2.33
PMS2P3-201ENST00000394921 FANCIQ9NVI1 1328 aa29.6■■■□□ 2.33
PMS2P3-201ENST00000394921 JDP2Q8WYK2 163 aa29.6■■■□□ 2.33
PMS2P3-201ENST00000394921 METTL22Q9BUU2 404 aaPredicted RBP29.6■■■□□ 2.33
PMS2P3-201ENST00000394921 COL4A1P02462 1669 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 IRS4O14654 1257 aaPredicted RBP29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 DDX58O95786 925 aaKnown RBP29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 POTEIP0CG38 1075 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 POTEJP0CG39 1038 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 HTRA3P83110 453 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 LARGE2Q8N3Y3 721 aa29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 ZBTB38Q8NAP3 1195 aaPredicted RBP29.59■■■□□ 2.33
PMS2P3-201ENST00000394921 RTFDC1Q9BY42 306 aaPredicted RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms