RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 KIF5CO60282 957 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 FBXW7Q969H0 707 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 KIF2CQ99661 725 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 BRMS1Q9HCU9 246 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 RBM8AQ9Y5S9 174 aaKnown RBP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 TXNDC2Q86VQ3 553 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 MRFAP1L1Q96HT8 127 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 HOXB7P09629 217 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 U2AF2P26368 475 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 ZSCAN25Q6NSZ9 544 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 TMC6Q7Z403 805 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 NOC3LQ8WTT2 800 aaKnown RBP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 DNAJC25Q9H1X3 360 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 ABCA6Q8N139 1617 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 USP32Q8NFA0 1604 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
GABRA1-202ENST00000393943 NFXL1Q6ZNB6 911 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 ATP8B1O43520 1251 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 HYPKQ9NX55 129 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 TRMT1Q9NXH9 659 aaKnown RBP10□□□□□ -0.81
GABRA1-202ENST00000393943 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 PKP1Q13835 747 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 LARP1Q6PKG0 1096 aaKnown RBP10□□□□□ -0.81
GABRA1-202ENST00000393943 RASSF8Q8NHQ8 419 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
GABRA1-202ENST00000393943 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
GABRA1-202ENST00000393943 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
GABRA1-202ENST00000393943 CCDC148Q8NFR7 591 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.81
GABRA1-202ENST00000393943 CBX8Q9HC52 389 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 LUZP1Q86V48 1076 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 C8orf76Q96K31 380 aa10□□□□□ -0.81
GABRA1-202ENST00000393943 QRICH2Q9H0J4 1663 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 TDRD7Q8NHU6 1098 aaKnown RBP9.99□□□□□ -0.81
GABRA1-202ENST00000393943 ANKRD24Q8TF21 1146 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 RDXP35241 583 aaKnown RBP9.99□□□□□ -0.81
GABRA1-202ENST00000393943 EIF4A2Q14240 407 aaKnown RBP9.99□□□□□ -0.81
GABRA1-202ENST00000393943 ARHGAP29Q52LW3 1261 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 KANK3Q6NY19 840 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 FLT4P35916 1363 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 FOSBP53539 338 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 FAM160A1Q05DH4 1040 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 IMMTQ16891 758 aaKnown RBP9.99□□□□□ -0.81
GABRA1-202ENST00000393943 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 TRIM22Q8IYM9 498 aa9.99□□□□□ -0.81
GABRA1-202ENST00000393943 CEP112Q8N8E3 955 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 KIAA0754O94854 1291 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 CCDC158Q5M9N0 1113 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 NEUROD6Q96NK8 337 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 ZNHIT6Q9NWK9 470 aaKnown RBP9.98□□□□□ -0.81
GABRA1-202ENST00000393943 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 H0YHG0 523 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 SIRT2Q8IXJ6 389 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 GOLGA1Q92805 767 aa9.98□□□□□ -0.81
GABRA1-202ENST00000393943 BTBD11A6QL63 1104 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 CSB-PGBD3P0DP91 1061 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 NAA16Q6N069 864 aaPredicted RBP9.97□□□□□ -0.81
GABRA1-202ENST00000393943 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
GABRA1-202ENST00000393943 BRAPQ7Z569 592 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 PES1O00541 588 aaKnown RBP9.97□□□□□ -0.81
GABRA1-202ENST00000393943 LEO1Q8WVC0 666 aaPredicted RBP9.97□□□□□ -0.81
GABRA1-202ENST00000393943 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 MTMR6Q9Y217 621 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 ADGRB3O60242 1522 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 TXLNAP40222 546 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 BRF1Q92994 677 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
GABRA1-202ENST00000393943 TOMM22Q9NS69 142 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 MIS18AQ9NYP9 233 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 TBC1D2BQ9UPU7 963 aa9.97□□□□□ -0.81
GABRA1-202ENST00000393943 MAP3K5Q99683 1374 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.81
GABRA1-202ENST00000393943 RPS6KB1P23443 525 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 OSCARQ8IYS5 282 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 NECAB1Q8N987 351 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 RAPGEF4Q8WZA2 1011 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 SIRT1Q96EB6 747 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 CRACR2AQ9BSW2 395 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.81
GABRA1-202ENST00000393943 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.81
GABRA1-202ENST00000393943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
GABRA1-202ENST00000393943 SHTN1A0MZ66 631 aa9.96□□□□□ -0.82
GABRA1-202ENST00000393943 POLR3GO15318 223 aaPredicted RBP9.96□□□□□ -0.82
GABRA1-202ENST00000393943 APPP05067 770 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms