RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 RUFY2Q8WXA3 655 aa23.28■■□□□ 1.32
UBTF-203ENST00000393606 PDRG1Q9NUG6 133 aa23.28■■□□□ 1.32
UBTF-203ENST00000393606 SMC3Q9UQE7 1217 aa23.28■■□□□ 1.32
UBTF-203ENST00000393606 WDR33Q9C0J8 1336 aaKnown RBP23.28■■□□□ 1.32
UBTF-203ENST00000393606 RPAP1Q9BWH6 1393 aaPredicted RBP23.27■■□□□ 1.32
UBTF-203ENST00000393606 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
UBTF-203ENST00000393606 NEXNQ0ZGT2 675 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 MPNDQ8N594 471 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 CHGBP05060 677 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 ERC1Q8IUD2 1116 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 FSD1Q9BTV5 496 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 NPHP3Q7Z494 1330 aa23.27■■□□□ 1.32
UBTF-203ENST00000393606 SYT1P21579 422 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 TSPY26PQ9H489 355 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 HEG1Q9ULI3 1381 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 TCHHQ07283 1943 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 NEURL1BA8MQ27 555 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 PHKG2P15735 406 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 EVI5LQ96CN4 794 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 FIBPO43427 364 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 ZHX1Q9UKY1 873 aaPredicted RBP23.26■■□□□ 1.31
UBTF-203ENST00000393606 RBM8AQ9Y5S9 174 aaKnown RBP23.26■■□□□ 1.31
UBTF-203ENST00000393606 TAF6LQ9Y6J9 622 aa23.26■■□□□ 1.31
UBTF-203ENST00000393606 A0A0D9SFI3 127 aa23.25■■□□□ 1.31
UBTF-203ENST00000393606 TTC5Q8N0Z6 440 aa23.25■■□□□ 1.31
UBTF-203ENST00000393606 ATF3P18847 181 aa23.25■■□□□ 1.31
UBTF-203ENST00000393606 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
UBTF-203ENST00000393606 C19orf44Q9H6X5 657 aa23.25■■□□□ 1.31
UBTF-203ENST00000393606 USP42Q9H9J4 1324 aaKnown RBP23.24■■□□□ 1.31
UBTF-203ENST00000393606 STX6O43752 255 aa23.24■■□□□ 1.31
UBTF-203ENST00000393606 GJB2P29033 226 aa23.24■■□□□ 1.31
UBTF-203ENST00000393606 GCKRQ14397 625 aa23.24■■□□□ 1.31
UBTF-203ENST00000393606 UBE3BQ7Z3V4 1068 aa23.24■■□□□ 1.31
UBTF-203ENST00000393606 CCDC39Q9UFE4 941 aa23.24■■□□□ 1.31
UBTF-203ENST00000393606 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 CHMP3Q9Y3E7 222 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 CYP46A1Q9Y6A2 500 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
UBTF-203ENST00000393606 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 VPS37CA5D8V6 355 aaPredicted RBP23.23■■□□□ 1.31
UBTF-203ENST00000393606 PTMAP06454 111 aaKnown RBP23.23■■□□□ 1.31
UBTF-203ENST00000393606 ZSCAN22P10073 491 aaPredicted RBP23.23■■□□□ 1.31
UBTF-203ENST00000393606 CCDC171Q6TFL3 1326 aa23.23■■□□□ 1.31
UBTF-203ENST00000393606 CREB3L3Q68CJ9 461 aa23.22■■□□□ 1.31
UBTF-203ENST00000393606 UQCRHLA0A096LP55 91 aa23.22■■□□□ 1.31
UBTF-203ENST00000393606 UQCRHP07919 91 aa23.22■■□□□ 1.31
UBTF-203ENST00000393606 IL17RAQ96F46 866 aa23.22■■□□□ 1.31
UBTF-203ENST00000393606 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.22■■□□□ 1.31
UBTF-203ENST00000393606 SLIT3O75094 1523 aa23.22■■□□□ 1.31
UBTF-203ENST00000393606 CYP27B1O15528 508 aa23.21■■□□□ 1.31
UBTF-203ENST00000393606 ME3Q16798 604 aa23.21■■□□□ 1.31
UBTF-203ENST00000393606 ZKSCAN1P17029 563 aaPredicted RBP23.21■■□□□ 1.31
UBTF-203ENST00000393606 STK3Q13188 491 aa23.21■■□□□ 1.31
UBTF-203ENST00000393606 ZNF589Q86UQ0 364 aaPredicted RBP23.21■■□□□ 1.31
UBTF-203ENST00000393606 SYAP1Q96A49 352 aaPredicted RBP23.21■■□□□ 1.31
UBTF-203ENST00000393606 HDAC5Q9UQL6 1122 aa23.21■■□□□ 1.31
UBTF-203ENST00000393606 TFCP2Q12800 502 aa23.2■■□□□ 1.3
UBTF-203ENST00000393606 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
UBTF-203ENST00000393606 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
UBTF-203ENST00000393606 DNAJC2Q99543 621 aaKnown RBP23.2■■□□□ 1.3
UBTF-203ENST00000393606 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
UBTF-203ENST00000393606 MEGF6O75095 1541 aa23.2■■□□□ 1.3
UBTF-203ENST00000393606 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
UBTF-203ENST00000393606 TERF1P54274 439 aa23.19■■□□□ 1.3
UBTF-203ENST00000393606 DNM1Q05193 864 aaKnown RBP23.19■■□□□ 1.3
UBTF-203ENST00000393606 TPCN1Q9ULQ1 816 aa23.19■■□□□ 1.3
UBTF-203ENST00000393606 CABP4P57796 275 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 A0A087WZG4 1122 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 SLC27A2O14975 620 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
UBTF-203ENST00000393606 F13A1P00488 732 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 ST3GAL1Q11201 340 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 FAM173BQ6P4H8 233 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 CCDC129Q6ZRS4 1044 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 ZSWIM6Q9HCJ5 1215 aa23.18■■□□□ 1.3
UBTF-203ENST00000393606 ZNF830Q96NB3 372 aaPredicted RBP23.17■■□□□ 1.3
UBTF-203ENST00000393606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
UBTF-203ENST00000393606 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
UBTF-203ENST00000393606 MCM5P33992 734 aa23.17■■□□□ 1.3
UBTF-203ENST00000393606 VPS53Q5VIR6 699 aa23.17■■□□□ 1.3
UBTF-203ENST00000393606 UTYO14607 1347 aa23.17■■□□□ 1.3
UBTF-203ENST00000393606 SLFNL1Q499Z3 407 aa23.16■■□□□ 1.3
UBTF-203ENST00000393606 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
UBTF-203ENST00000393606 DBNLQ9UJU6 430 aaKnown RBP23.16■■□□□ 1.3
UBTF-203ENST00000393606 MAP4K1Q92918 833 aa23.16■■□□□ 1.3
UBTF-203ENST00000393606 USP25Q9UHP3 1055 aa23.16■■□□□ 1.3
UBTF-203ENST00000393606 PHRF1Q9P1Y6 1649 aaKnown RBP23.15■■□□□ 1.3
UBTF-203ENST00000393606 C5P01031 1676 aa23.15■■□□□ 1.3
UBTF-203ENST00000393606 CSPP1Q1MSJ5 1256 aa23.15■■□□□ 1.3
UBTF-203ENST00000393606 TMEM94Q12767 1356 aa23.15■■□□□ 1.3
UBTF-203ENST00000393606 DBNDD2Q9BQY9 259 aa23.14■■□□□ 1.29
UBTF-203ENST00000393606 ZNF330Q9Y3S2 320 aaPredicted RBP23.14■■□□□ 1.29
UBTF-203ENST00000393606 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.29
UBTF-203ENST00000393606 PHF14O94880 888 aa23.14■■□□□ 1.29
UBTF-203ENST00000393606 PTPN12Q05209 780 aaKnown RBP23.14■■□□□ 1.29
UBTF-203ENST00000393606 DDX46Q7L014 1031 aaKnown RBP23.14■■□□□ 1.29
UBTF-203ENST00000393606 FMNL2Q96PY5 1086 aa23.14■■□□□ 1.29
UBTF-203ENST00000393606 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.29
UBTF-203ENST00000393606 PLCB2Q00722 1185 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms