RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 MYL6BP14649 208 aa16.2■□□□□ 0.18
CTSC-202ENST00000393301 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
CTSC-202ENST00000393301 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
CTSC-202ENST00000393301 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
CTSC-202ENST00000393301 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
CTSC-202ENST00000393301 COL4A5P29400 1685 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
CTSC-202ENST00000393301 ZNF277Q9NRM2 450 aaPredicted RBP16.19■□□□□ 0.18
CTSC-202ENST00000393301 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
CTSC-202ENST00000393301 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 OLFM4Q6UX06 510 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
CTSC-202ENST00000393301 LRRC37AA6NMS7 1700 aa16.17■□□□□ 0.18
CTSC-202ENST00000393301 GPTP24298 496 aa16.17■□□□□ 0.18
CTSC-202ENST00000393301 PROSER3Q2NL68 480 aa16.17■□□□□ 0.18
CTSC-202ENST00000393301 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
CTSC-202ENST00000393301 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTSC-202ENST00000393301 POTEIP0CG38 1075 aa16.16■□□□□ 0.18
CTSC-202ENST00000393301 POTEJP0CG39 1038 aa16.16■□□□□ 0.18
CTSC-202ENST00000393301 GPC2Q8N158 579 aa16.16■□□□□ 0.18
CTSC-202ENST00000393301 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
CTSC-202ENST00000393301 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
CTSC-202ENST00000393301 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
CTSC-202ENST00000393301 DDX60Q8IY21 1712 aaKnown RBP16.15■□□□□ 0.18
CTSC-202ENST00000393301 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
CTSC-202ENST00000393301 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
CTSC-202ENST00000393301 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
CTSC-202ENST00000393301 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
CTSC-202ENST00000393301 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
CTSC-202ENST00000393301 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
CTSC-202ENST00000393301 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
CTSC-202ENST00000393301 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
CTSC-202ENST00000393301 ITGBL1O95965 494 aaPredicted RBP16.13■□□□□ 0.17
CTSC-202ENST00000393301 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
CTSC-202ENST00000393301 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 ABCC4O15439 1325 aa16.13■□□□□ 0.17
CTSC-202ENST00000393301 ANXA1P04083 346 aa16.12■□□□□ 0.17
CTSC-202ENST00000393301 EPHX2P34913 555 aa16.12■□□□□ 0.17
CTSC-202ENST00000393301 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTSC-202ENST00000393301 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
CTSC-202ENST00000393301 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
CTSC-202ENST00000393301 CNTNAP1P78357 1384 aa16.12■□□□□ 0.17
CTSC-202ENST00000393301 BBOX1O75936 387 aa16.11■□□□□ 0.17
CTSC-202ENST00000393301 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
CTSC-202ENST00000393301 DUOX1Q9NRD9 1551 aa16.11■□□□□ 0.17
CTSC-202ENST00000393301 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
CTSC-202ENST00000393301 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
CTSC-202ENST00000393301 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
CTSC-202ENST00000393301 ISCA1Q9BUE6 129 aa16.1■□□□□ 0.17
CTSC-202ENST00000393301 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
CTSC-202ENST00000393301 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
CTSC-202ENST00000393301 THSD7BQ9C0I4 1608 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 SCNN1DP51172 638 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 EIF6P56537 245 aaKnown RBP16.09■□□□□ 0.17
CTSC-202ENST00000393301 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 TRPM7Q96QT4 1865 aa16.09■□□□□ 0.17
CTSC-202ENST00000393301 TAF1P21675 1872 aa16.08■□□□□ 0.17
CTSC-202ENST00000393301 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
CTSC-202ENST00000393301 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
CTSC-202ENST00000393301 LARGE2Q8N3Y3 721 aa16.08■□□□□ 0.16
CTSC-202ENST00000393301 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.16
CTSC-202ENST00000393301 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
CTSC-202ENST00000393301 TMEM88BA6NKF7 163 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 GRAPQ13588 217 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
CTSC-202ENST00000393301 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
CTSC-202ENST00000393301 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
CTSC-202ENST00000393301 ANP32CO43423 234 aa16.06■□□□□ 0.16
CTSC-202ENST00000393301 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
CTSC-202ENST00000393301 AIMP1Q12904 312 aaKnown RBP16.06■□□□□ 0.16
CTSC-202ENST00000393301 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
CTSC-202ENST00000393301 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
CTSC-202ENST00000393301 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
CTSC-202ENST00000393301 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
CTSC-202ENST00000393301 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
CTSC-202ENST00000393301 RASSF10A6NK89 507 aa16.05■□□□□ 0.16
CTSC-202ENST00000393301 PPIP5K2O43314 1243 aa16.05■□□□□ 0.16
CTSC-202ENST00000393301 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
CTSC-202ENST00000393301 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
CTSC-202ENST00000393301 DUSP27Q5VZP5 1158 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms