RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
CASP4-201ENST00000393150 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
CASP4-201ENST00000393150 INSRP06213 1382 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 TRIM6-TRIM34B2RNG4 842 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
CASP4-201ENST00000393150 FBLN1P23142 703 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 CTCFP49711 727 aaPredicted RBP10.9□□□□□ -0.66
CASP4-201ENST00000393150 PSEN2P49810 448 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 AMIGO3Q86WK7 504 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 ASAP1Q9ULH1 1129 aa10.9□□□□□ -0.66
CASP4-201ENST00000393150 FLT4P35916 1363 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 ZPR1O75312 459 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 GYS1P13807 737 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 CLCN1P35523 988 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 ITPK1Q13572 414 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
CASP4-201ENST00000393150 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
CASP4-201ENST00000393150 EMP3P54852 163 aa10.88□□□□□ -0.67
CASP4-201ENST00000393150 GGNBP2Q9H3C7 697 aa10.88□□□□□ -0.67
CASP4-201ENST00000393150 UBR3Q6ZT12 1888 aa10.88□□□□□ -0.67
CASP4-201ENST00000393150 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
CASP4-201ENST00000393150 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
CASP4-201ENST00000393150 ATG3Q9NT62 314 aa10.87□□□□□ -0.67
CASP4-201ENST00000393150 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
CASP4-201ENST00000393150 CNTNAP4Q9C0A0 1308 aa10.87□□□□□ -0.67
CASP4-201ENST00000393150 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 FYB1O15117 783 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 KCNA3P22001 575 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 CABP4P57796 275 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
CASP4-201ENST00000393150 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
CASP4-201ENST00000393150 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 PHKG2P15735 406 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 CHRNA5P30532 468 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 TATDN2Q93075 761 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
CASP4-201ENST00000393150 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
CASP4-201ENST00000393150 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
CASP4-201ENST00000393150 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 H0YIN7 160 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
CASP4-201ENST00000393150 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 IQCA1LA6NCM1 817 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 MLLT1Q03111 559 aaPredicted RBP10.84□□□□□ -0.67
CASP4-201ENST00000393150 ERFEQ4G0M1 354 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 PLEKHO1Q53GL0 409 aaPredicted RBP10.84□□□□□ -0.67
CASP4-201ENST00000393150 SLC4A5Q9BY07 1137 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
CASP4-201ENST00000393150 KIF13BQ9NQT8 1826 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 SMAPO00193 183 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 FOXN1O15353 648 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
CASP4-201ENST00000393150 MAP2K1Q02750 393 aaPredicted RBP10.83□□□□□ -0.68
CASP4-201ENST00000393150 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 PACS2Q86VP3 889 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
CASP4-201ENST00000393150 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 C4AP0C0L4 1744 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 ITGB4P16144 1822 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 NPHP1O15259 732 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
CASP4-201ENST00000393150 MTHFSP49914 203 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 RASSF7Q02833 373 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
CASP4-201ENST00000393150 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
CASP4-201ENST00000393150 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
CASP4-201ENST00000393150 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
CASP4-201ENST00000393150 CCDC85CA6NKD9 419 aa10.81□□□□□ -0.68
CASP4-201ENST00000393150 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
CASP4-201ENST00000393150 PBX2P40425 430 aa10.81□□□□□ -0.68
CASP4-201ENST00000393150 C2CD5Q86YS7 1000 aa10.81□□□□□ -0.68
CASP4-201ENST00000393150 SRP68Q9UHB9 627 aaKnown RBP10.81□□□□□ -0.68
CASP4-201ENST00000393150 USP42Q9H9J4 1324 aaKnown RBP10.81□□□□□ -0.68
CASP4-201ENST00000393150 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
CASP4-201ENST00000393150 LBX1P52954 281 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 WASHC2AQ641Q2 1341 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 PKD1L3Q7Z443 1732 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 LDHDQ86WU2 507 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 ZNF622Q969S3 477 aaKnown RBP eCLIP10.8□□□□□ -0.68
CASP4-201ENST00000393150 TONSLQ96HA7 1378 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 TOGARAM1Q9Y4F4 1720 aa10.8□□□□□ -0.68
CASP4-201ENST00000393150 EMILIN1Q9Y6C2 1016 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms