RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
USP44-202ENST00000393091 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
USP44-202ENST00000393091 DDR1Q08345 913 aa16.83■□□□□ 0.28
USP44-202ENST00000393091 ZBTB38Q8NAP3 1195 aaPredicted RBP16.83■□□□□ 0.28
USP44-202ENST00000393091 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
USP44-202ENST00000393091 ZBTB3Q9H5J0 574 aa16.82■□□□□ 0.28
USP44-202ENST00000393091 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
USP44-202ENST00000393091 SRCIN1Q9C0H9 1055 aa16.82■□□□□ 0.28
USP44-202ENST00000393091 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
USP44-202ENST00000393091 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
USP44-202ENST00000393091 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
USP44-202ENST00000393091 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
USP44-202ENST00000393091 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
USP44-202ENST00000393091 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
USP44-202ENST00000393091 HSP90B1P14625 803 aaKnown RBP16.81■□□□□ 0.28
USP44-202ENST00000393091 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
USP44-202ENST00000393091 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
USP44-202ENST00000393091 MYD88Q99836 296 aa16.8■□□□□ 0.28
USP44-202ENST00000393091 SUSD4Q5VX71 490 aa16.8■□□□□ 0.28
USP44-202ENST00000393091 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
USP44-202ENST00000393091 UTP14AQ9BVJ6 771 aaKnown RBP16.79■□□□□ 0.28
USP44-202ENST00000393091 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
USP44-202ENST00000393091 NIP7Q9Y221 180 aaKnown RBP eCLIP16.79■□□□□ 0.28
USP44-202ENST00000393091 RLBP1P12271 317 aa16.79■□□□□ 0.28
USP44-202ENST00000393091 ZBTB7BO15156 539 aaPredicted RBP16.79■□□□□ 0.28
USP44-202ENST00000393091 CRY2Q49AN0 593 aa16.79■□□□□ 0.28
USP44-202ENST00000393091 USP44Q9H0E7 712 aa16.79■□□□□ 0.28
USP44-202ENST00000393091 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
USP44-202ENST00000393091 F6X3S4 739 aa16.78■□□□□ 0.28
USP44-202ENST00000393091 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
USP44-202ENST00000393091 GRM8O00222 908 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 SERPINB2P05120 415 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 MTX1Q13505 466 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 PRR5LQ6MZQ0 368 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 TPTE2Q6XPS3 522 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.28
USP44-202ENST00000393091 CSF1RP07333 972 aa16.77■□□□□ 0.27
USP44-202ENST00000393091 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.27
USP44-202ENST00000393091 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.27
USP44-202ENST00000393091 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
USP44-202ENST00000393091 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.27
USP44-202ENST00000393091 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.27
USP44-202ENST00000393091 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
USP44-202ENST00000393091 MMP10P09238 476 aa16.76■□□□□ 0.27
USP44-202ENST00000393091 ABCC12Q96J65 1359 aa16.76■□□□□ 0.27
USP44-202ENST00000393091 GNAI3P08754 354 aa16.75■□□□□ 0.27
USP44-202ENST00000393091 SPON1Q9HCB6 807 aa16.75■□□□□ 0.27
USP44-202ENST00000393091 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
USP44-202ENST00000393091 TNNQ9UQP3 1299 aa16.75■□□□□ 0.27
USP44-202ENST00000393091 HOXA10P31260 410 aaPredicted RBP16.75■□□□□ 0.27
USP44-202ENST00000393091 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
USP44-202ENST00000393091 ZBTB40Q9NUA8 1239 aa16.75■□□□□ 0.27
USP44-202ENST00000393091 POLD1P28340 1107 aa16.74■□□□□ 0.27
USP44-202ENST00000393091 TGFB2P61812 414 aa16.74■□□□□ 0.27
USP44-202ENST00000393091 FOXO4P98177 505 aa16.74■□□□□ 0.27
USP44-202ENST00000393091 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
USP44-202ENST00000393091 KAZALD1Q96I82 304 aa16.74■□□□□ 0.27
USP44-202ENST00000393091 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
USP44-202ENST00000393091 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
USP44-202ENST00000393091 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
USP44-202ENST00000393091 PDE8AO60658 829 aa16.73■□□□□ 0.27
USP44-202ENST00000393091 ST5P78524 1137 aa16.73■□□□□ 0.27
USP44-202ENST00000393091 CACNA1SQ13698 1873 aa16.73■□□□□ 0.27
USP44-202ENST00000393091 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
USP44-202ENST00000393091 FER1L6Q2WGJ9 1857 aa16.72■□□□□ 0.27
USP44-202ENST00000393091 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
USP44-202ENST00000393091 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
USP44-202ENST00000393091 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
USP44-202ENST00000393091 COL4A1P02462 1669 aa16.72■□□□□ 0.27
USP44-202ENST00000393091 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
USP44-202ENST00000393091 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
USP44-202ENST00000393091 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
USP44-202ENST00000393091 PDE6BP35913 854 aa16.71■□□□□ 0.27
USP44-202ENST00000393091 STYK1Q6J9G0 422 aa16.71■□□□□ 0.27
USP44-202ENST00000393091 TRMT112Q9UI30 125 aaKnown RBP16.71■□□□□ 0.27
USP44-202ENST00000393091 PANK1Q8TE04 598 aa16.71■□□□□ 0.26
USP44-202ENST00000393091 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.26
USP44-202ENST00000393091 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
USP44-202ENST00000393091 ZBTB22O15209 634 aa16.7■□□□□ 0.26
USP44-202ENST00000393091 GPTP24298 496 aa16.7■□□□□ 0.26
USP44-202ENST00000393091 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
USP44-202ENST00000393091 PLIN1O60240 522 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
USP44-202ENST00000393091 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
USP44-202ENST00000393091 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 MSH5O43196 834 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 CTSWP56202 376 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 POLA2Q14181 598 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 ARXQ96QS3 562 aa16.69■□□□□ 0.26
USP44-202ENST00000393091 MEIS3Q99687 375 aa16.68■□□□□ 0.26
USP44-202ENST00000393091 TAF1P21675 1872 aa16.68■□□□□ 0.26
USP44-202ENST00000393091 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
USP44-202ENST00000393091 TMC4Q7Z404 712 aa16.68■□□□□ 0.26
USP44-202ENST00000393091 SUCLG2Q96I99 432 aa16.68■□□□□ 0.26
USP44-202ENST00000393091 GNAI2P04899 355 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
USP44-202ENST00000393091 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms