RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
HDLBP-203ENST00000391975 DTNBO60941 627 aa13.4□□□□□ -0.26
HDLBP-203ENST00000391975 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
HDLBP-203ENST00000391975 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
HDLBP-203ENST00000391975 WDR62O43379 1518 aa13.4□□□□□ -0.26
HDLBP-203ENST00000391975 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
HDLBP-203ENST00000391975 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
HDLBP-203ENST00000391975 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
HDLBP-203ENST00000391975 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
HDLBP-203ENST00000391975 FKBP4Q02790 459 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■□□□ 12.8
HDLBP-203ENST00000391975 IKQ13123 557 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-203ENST00000391975 BRD1O95696 1058 aa13.39□□□□□ -0.27
HDLBP-203ENST00000391975 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-203ENST00000391975 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
HDLBP-203ENST00000391975 DDX23Q9BUQ8 820 aaKnown RBP13.39□□□□□ -0.27
HDLBP-203ENST00000391975 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
HDLBP-203ENST00000391975 MAGI2Q86UL8 1455 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 MICALCLQ6ZW33 695 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 C8orf76Q96K31 380 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■□□□ 12.7
HDLBP-203ENST00000391975 HSPA2P54652 639 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 STIM1Q13586 685 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 KIF4BQ2VIQ3 1234 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
HDLBP-203ENST00000391975 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 LMAN1P49257 510 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-203ENST00000391975 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
HDLBP-203ENST00000391975 CASQ1P31415 396 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 BRF1Q92994 677 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 ADGRL2O95490 1459 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 PI4KAP2A4QPH2 592 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
HDLBP-203ENST00000391975 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
HDLBP-203ENST00000391975 PI4KAP1Q8N8J0 262 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-203ENST00000391975 GNG11P61952 73 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-203ENST00000391975 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 TAF4BQ92750 862 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 ANXA1P04083 346 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 DESP17661 470 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
HDLBP-203ENST00000391975 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-203ENST00000391975 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-203ENST00000391975 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
HDLBP-203ENST00000391975 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 AOPEPQ8N6M6 819 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 CCDC150Q8NCX0 1101 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 C8orf37Q96NL8 207 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
HDLBP-203ENST00000391975 TTC39AQ5SRH9 613 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-203ENST00000391975 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-203ENST00000391975 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 CPLX3Q8WVH0 158 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 KIF5CO60282 957 aa13.35□□□□□ -0.27
HDLBP-203ENST00000391975 KDM5CP41229 1560 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 CDKL5O76039 1030 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 GRM1Q13255 1194 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
HDLBP-203ENST00000391975 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
HDLBP-203ENST00000391975 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.27
HDLBP-203ENST00000391975 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
HDLBP-203ENST00000391975 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-203ENST00000391975 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 MSH6P52701 1360 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 CLGNO14967 610 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
HDLBP-203ENST00000391975 G2E3Q7L622 706 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.28
HDLBP-203ENST00000391975 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 DAAM2Q86T65 1068 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 HMG20BQ9P0W2 317 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 GCC2Q8IWJ2 1684 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
HDLBP-203ENST00000391975 ARFGAP3Q9NP61 516 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms