RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 VPS53Q5VIR6 699 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 PIBF1Q8WXW3 757 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 BICC1Q9H694 974 aaKnown RBP25.04■■□□□ 1.6
COL23A1-201ENST00000390654 DYNC1I1O14576 645 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 FOSBP53539 338 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 ZSWIM6Q9HCJ5 1215 aa25.04■■□□□ 1.6
COL23A1-201ENST00000390654 DBF4Q9UBU7 674 aaPredicted RBP25.04■■□□□ 1.6
COL23A1-201ENST00000390654 TTC41PQ6P2S7 1318 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 GPATCH3Q96I76 525 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 SASH1O94885 1247 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 UVSSAQ2YD98 709 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 PYCARDQ9ULZ3 195 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
COL23A1-201ENST00000390654 NECTIN1Q15223 517 aa25.02■■□□□ 1.6
COL23A1-201ENST00000390654 G3BP1Q13283 466 aaKnown RBP eCLIP25.02■■□□□ 1.6
COL23A1-201ENST00000390654 LUZP1Q86V48 1076 aa25.01■■□□□ 1.6
COL23A1-201ENST00000390654 DDX17Q92841 729 aaKnown RBP25.01■■□□□ 1.59
COL23A1-201ENST00000390654 DDX11Q96FC9 970 aa25.01■■□□□ 1.59
COL23A1-201ENST00000390654 EVI5LQ96CN4 794 aa25.01■■□□□ 1.59
COL23A1-201ENST00000390654 AXIN2Q9Y2T1 843 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 CEMIPQ8WUJ3 1361 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 SLC27A2O14975 620 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 GCP02774 474 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 PLEKHO1Q53GL0 409 aaPredicted RBP25■■□□□ 1.59
COL23A1-201ENST00000390654 ZNF589Q86UQ0 364 aaPredicted RBP25■■□□□ 1.59
COL23A1-201ENST00000390654 FUCA2Q9BTY2 467 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 BABAM1Q9NWV8 329 aa25■■□□□ 1.59
COL23A1-201ENST00000390654 LETM1O95202 739 aaPredicted RBP24.99■■□□□ 1.59
COL23A1-201ENST00000390654 KAZALD1Q96I82 304 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 CEBPZQ03701 1054 aaKnown RBP24.99■■□□□ 1.59
COL23A1-201ENST00000390654 ANKRD24Q8TF21 1146 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 GOLGA6L4A6NEF3 574 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 EPB41L2O43491 1005 aaKnown RBP24.99■■□□□ 1.59
COL23A1-201ENST00000390654 LARP1Q6PKG0 1096 aaKnown RBP24.99■■□□□ 1.59
COL23A1-201ENST00000390654 KSR2Q6VAB6 950 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 LRRC2Q9BYS8 371 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 KCNF1Q9H3M0 494 aa24.99■■□□□ 1.59
COL23A1-201ENST00000390654 GIGYF1O75420 1035 aaPredicted RBP24.98■■□□□ 1.59
COL23A1-201ENST00000390654 DACT1Q9NYF0 836 aa24.98■■□□□ 1.59
COL23A1-201ENST00000390654 BLOC1S2Q6QNY1 142 aa24.97■■□□□ 1.59
COL23A1-201ENST00000390654 ZSCAN31Q96LW9 406 aaPredicted RBP24.97■■□□□ 1.59
COL23A1-201ENST00000390654 RNMTO43148 476 aaKnown RBP24.97■■□□□ 1.59
COL23A1-201ENST00000390654 MYRIPQ8NFW9 859 aa24.97■■□□□ 1.59
COL23A1-201ENST00000390654 SH2B1Q9NRF2 756 aaPredicted RBP24.97■■□□□ 1.59
COL23A1-201ENST00000390654 GRM8O00222 908 aa24.97■■□□□ 1.59
COL23A1-201ENST00000390654 KRT85P78386 507 aa24.97■■□□□ 1.59
COL23A1-201ENST00000390654 JAK2O60674 1132 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 CCDC192P0DO97 292 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 AKAP4Q5JQC9 854 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 RIC3Q7Z5B4 369 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 CCDC129Q6ZRS4 1044 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 DRC7Q8IY82 874 aa24.96■■□□□ 1.59
COL23A1-201ENST00000390654 PTGS1P23219 599 aa24.95■■□□□ 1.59
COL23A1-201ENST00000390654 MAP4K1Q92918 833 aa24.95■■□□□ 1.59
COL23A1-201ENST00000390654 NUP62CLQ9H1M0 184 aa24.95■■□□□ 1.59
COL23A1-201ENST00000390654 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
COL23A1-201ENST00000390654 NLRP2Q9NX02 1062 aa24.95■■□□□ 1.58
COL23A1-201ENST00000390654 LRRC37A3O60309 1634 aa24.95■■□□□ 1.58
COL23A1-201ENST00000390654 USP42Q9H9J4 1324 aaKnown RBP24.94■■□□□ 1.58
COL23A1-201ENST00000390654 SEC62Q99442 399 aaKnown RBP24.94■■□□□ 1.58
COL23A1-201ENST00000390654 MAP3K11Q16584 847 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 EPHA10Q5JZY3 1008 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 SPATA32Q96LK8 384 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 TYRO3Q06418 890 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 LRMPQ12912 555 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 SLFNL1Q499Z3 407 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 ERC1Q8IUD2 1116 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 ZNF710Q8N1W2 664 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 DNAJC2Q99543 621 aaKnown RBP24.93■■□□□ 1.58
COL23A1-201ENST00000390654 TNMDQ9H2S6 317 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 NRBP1Q9UHY1 535 aa24.93■■□□□ 1.58
COL23A1-201ENST00000390654 MTX1Q13505 466 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 ANO6Q4KMQ2 910 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 MAP7D2Q96T17 732 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 CABLES1Q8TDN4 633 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 TM6SF1Q9BZW5 370 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 HSP90B1P14625 803 aaKnown RBP24.92■■□□□ 1.58
COL23A1-201ENST00000390654 BICD2Q8TD16 824 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 MRVI1Q9Y6F6 885 aa24.92■■□□□ 1.58
COL23A1-201ENST00000390654 A0A087WWV3 80 aa24.91■■□□□ 1.58
COL23A1-201ENST00000390654 TOB2Q14106 344 aaPredicted RBP24.91■■□□□ 1.58
COL23A1-201ENST00000390654 PXDNQ92626 1479 aa24.91■■□□□ 1.58
COL23A1-201ENST00000390654 ALDH1L1O75891 902 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 HOXB7P09629 217 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 NAP1L2Q9ULW6 460 aaPredicted RBP24.9■■□□□ 1.58
COL23A1-201ENST00000390654 IGKV5-2P06315 115 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 PSMA5P28066 241 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 LINS1Q8NG48 757 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 FBXW7Q969H0 707 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 MYD88Q99836 296 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 CACNA1FO60840 1977 aa24.9■■□□□ 1.58
COL23A1-201ENST00000390654 NR1I2O75469 434 aa24.89■■□□□ 1.58
COL23A1-201ENST00000390654 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.58
COL23A1-201ENST00000390654 CCDC186Q7Z3E2 898 aa24.89■■□□□ 1.58
COL23A1-201ENST00000390654 KCNH5Q8NCM2 988 aa24.89■■□□□ 1.58
COL23A1-201ENST00000390654 KIAA1524Q8TCG1 905 aa24.89■■□□□ 1.58
COL23A1-201ENST00000390654 RPS6KB1P23443 525 aa24.89■■□□□ 1.57
COL23A1-201ENST00000390654 CBX1P83916 185 aa24.89■■□□□ 1.57
COL23A1-201ENST00000390654 NFATC2IPQ8NCF5 419 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms