RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 C9orf131Q5VYM1 1079 aa14.74□□□□□ -0.05
IGHV4-28-201ENST00000390612 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
IGHV4-28-201ENST00000390612 PPP1R42Q7Z4L9 355 aa14.74□□□□□ -0.05
IGHV4-28-201ENST00000390612 ISCA1Q9BUE6 129 aa14.74□□□□□ -0.05
IGHV4-28-201ENST00000390612 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
IGHV4-28-201ENST00000390612 ZNF521Q96K83 1311 aa14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 GTF2E1P29083 439 aaPredicted RBP14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 CCDC30Q5VVM6 783 aa14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 UTP14AQ9BVJ6 771 aaKnown RBP14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 PHAXQ9H814 394 aaKnown RBP14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
IGHV4-28-201ENST00000390612 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 LTBP3Q9NS15 1303 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 FANCIQ9NVI1 1328 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 C21orf2O43822 256 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 RASSF7Q02833 373 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 C3orf67Q6ZVT6 689 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 TAF1P21675 1872 aa14.72□□□□□ -0.05
IGHV4-28-201ENST00000390612 LMNB1P20700 586 aa14.71□□□□□ -0.05
IGHV4-28-201ENST00000390612 ALDH1B1P30837 517 aa14.71□□□□□ -0.05
IGHV4-28-201ENST00000390612 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
IGHV4-28-201ENST00000390612 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
IGHV4-28-201ENST00000390612 SNED1Q8TER0 1413 aa14.71□□□□□ -0.05
IGHV4-28-201ENST00000390612 ZC3H4Q9UPT8 1303 aaKnown RBP14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 VAMP4O75379 141 aa14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 SOGA3Q5TF21 947 aa14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
IGHV4-28-201ENST00000390612 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
IGHV4-28-201ENST00000390612 GPBP1L1Q9HC44 474 aaPredicted RBP14.69□□□□□ -0.06
IGHV4-28-201ENST00000390612 CEP350Q5VT06 3117 aa14.68□□□□□ -0.06
IGHV4-28-201ENST00000390612 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
IGHV4-28-201ENST00000390612 NLRP3Q96P20 1036 aa14.68□□□□□ -0.06
IGHV4-28-201ENST00000390612 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
IGHV4-28-201ENST00000390612 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
IGHV4-28-201ENST00000390612 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 KIF3CO14782 793 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 G2E3Q7L622 706 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 RIC3Q7Z5B4 369 aa14.67□□□□□ -0.06
IGHV4-28-201ENST00000390612 HCLS1P14317 486 aaPredicted RBP14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 KSR2Q6VAB6 950 aa14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 ZNF526Q8TF50 670 aaPredicted RBP14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 RPGRQ92834 1020 aaKnown RBP14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 METTL22Q9BUU2 404 aaPredicted RBP14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 MYH3P11055 1940 aa14.66□□□□□ -0.06
IGHV4-28-201ENST00000390612 TCERG1O14776 1098 aaKnown RBP14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 DDX58O95786 925 aaKnown RBP14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 SLC4A2P04920 1241 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 CC2D2BQ6DHV5 1058 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 RTKN2Q8IZC4 609 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 CCDC191Q8NCU4 936 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 RBM17Q96I25 401 aaKnown RBP14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 STK31Q9BXU1 1019 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 MYH16Q9H6N6 1097 aa14.65□□□□□ -0.06
IGHV4-28-201ENST00000390612 PI4KAP2A4QPH2 592 aa14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 SF3B3Q15393 1217 aaKnown RBP14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 PI4KAP1Q8N8J0 262 aa14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 ZBTB38Q8NAP3 1195 aaPredicted RBP14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 MYD88Q99836 296 aa14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 MAP3K2Q9Y2U5 619 aa14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 ABCC4O15439 1325 aa14.64□□□□□ -0.07
IGHV4-28-201ENST00000390612 GLTPD2A6NH11 291 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 PSMD1Q99460 953 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 NMRK2Q9NPI5 230 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 LRRC37AA6NMS7 1700 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 WDR90Q96KV7 1748 aa14.63□□□□□ -0.07
IGHV4-28-201ENST00000390612 BBOX1O75936 387 aa14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 PCCAP05165 728 aaPredicted RBP14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 FLIIQ13045 1269 aa14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 SLC51AQ86UW1 340 aa14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
IGHV4-28-201ENST00000390612 COL4A1P02462 1669 aa14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 PPEF1O14829 653 aaPredicted RBP14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 SLFN5Q08AF3 891 aa14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 TRMT2AQ8IZ69 625 aaKnown RBP14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
IGHV4-28-201ENST00000390612 POTECB2RU33 542 aa14.6□□□□□ -0.07
IGHV4-28-201ENST00000390612 DDX46Q7L014 1031 aaKnown RBP14.6□□□□□ -0.07
IGHV4-28-201ENST00000390612 SP8Q8IXZ3 490 aa14.6□□□□□ -0.07
IGHV4-28-201ENST00000390612 ZNF277Q9NRM2 450 aaPredicted RBP14.6□□□□□ -0.07
IGHV4-28-201ENST00000390612 COL4A5P29400 1685 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 E9PSI1 815 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms