RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 WBP1LQ9NX94 342 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 KLHL42Q9P2K6 505 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 SUGT1Q9Y2Z0 365 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 RIPOR2Q9Y4F9 1068 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 LOC102724159A0A0B4J2E5 919 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 U2SURPO15042 1029 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 LILRA1O75019 489 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 USP17L7P0C7H9 530 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 RLBP1P12271 317 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 RAB33AQ14088 237 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 PWP2Q15269 919 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TLR1Q15399 786 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 HSP90AB2PQ58FF8 381 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ARSHQ5FYA8 562 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TAF7LQ5H9L4 462 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 MEI1Q5TIA1 1274 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ANKS3Q6ZW76 656 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TREML1Q86YW5 311 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 KIAA0825Q8IV33 1275 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 MPNDQ8N594 471 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ZNF784Q8NCA9 323 aaPredicted RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 GPR152Q8TDT2 470 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 SNX29Q8TEQ0 813 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 L3MBTL2Q969R5 705 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 RNPC3Q96LT9 517 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 SRPK1Q96SB4 655 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 PSMD1Q99460 953 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 MTRQ99707 1265 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ESYT1Q9BSJ8 1104 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 SPON2Q9BUD6 331 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TRIM55Q9BYV6 548 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 MYH16Q9H6N6 1097 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ZNF408Q9H9D4 720 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ZFYVE28Q9HCC9 887 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TMPRSS4Q9NRS4 437 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 KLK14Q9P0G3 267 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 MAGEC2Q9UBF1 373 aaPredicted RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 ZNF232Q9UNY5 417 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 FNDC3AQ9Y2H6 1198 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 FCF1Q9Y324 198 aaKnown RBP2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 HCN4Q9Y3Q4 1203 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 HRH3Q9Y5N1 445 aa2.32□□□□□ -2.04
TRAJ39-201ENST00000390498 TPD52L2O43399 206 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 KLF4O43474 513 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 TNFRSF21O75509 655 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 MICAL2O94851 1124 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PARNO95453 639 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 S1PR4O95977 384 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 IL2RAP01589 272 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 GSTT1P30711 240 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 GRM5P41594 1212 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 SOX9P48436 509 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 NASPP49321 788 aaPredicted RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 EMP3P54852 163 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CHMP4BP1P59074 171 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 NR5A1Q13285 461 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CLN3Q13286 438 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PLEKHG6Q3KR16 790 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PDE12Q6L8Q7 609 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PPARGC1BQ86YN6 1023 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 RELL1Q8IUW5 271 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CCDC116Q8IYX3 515 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 ZNF295-AS1Q8N0V1 137 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 NKX2-3Q8TAU0 364 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 EPS8L3Q8TE67 593 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 ANKRD24Q8TF21 1146 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 ZDHHC1Q8WTX9 485 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CNKSR1Q969H4 720 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 DEPDC7Q96QD5 511 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PCGF6Q9BYE7 350 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PHACTR1Q9C0D0 580 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CCDC113Q9H0I3 377 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 IRF2BPLQ9H1B7 796 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 IL21Q9HBE4 155 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 ARHGEF10LQ9HCE6 1279 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 COPRSQ9NQ92 184 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 TYW1Q9NV66 732 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 KBTBD4Q9NVX7 518 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PGPEP1Q9NXJ5 209 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 PPP4R2Q9NY27 417 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 DDX56Q9NY93 547 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 SNTG2Q9NY99 539 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CABP1Q9NZU7 370 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 CHPF2Q9P2E5 772 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 FAN1Q9Y2M0 1017 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 R3HCC1Q9Y3T6 440 aaKnown RBP2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 USP3Q9Y6I4 520 aa2.31□□□□□ -2.04
TRAJ39-201ENST00000390498 POTEB3A0JP26 581 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 A6NHS1 94 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 TGFBR3LH3BV60 316 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 PHACTR2O75167 634 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 CDC45O75419 566 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 S100BP04271 92 aaPredicted RBP2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 FSHRP23945 695 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 GTF2E1P29083 439 aaPredicted RBP2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 IRS1P35568 1242 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 ADD1P35611 737 aaKnown RBP2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 ETFBP38117 255 aa2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 EIF4A3P38919 411 aaKnown RBP2.3□□□□□ -2.04
TRAJ39-201ENST00000390498 SKOR1P84550 965 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms