RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
TRAV17-201ENST00000390445 MTHFSP49914 203 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
TRAV17-201ENST00000390445 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
TRAV17-201ENST00000390445 HMOX1P09601 288 aa11.35□□□□□ -0.59
TRAV17-201ENST00000390445 SSFA2P28290 1259 aa11.35□□□□□ -0.59
TRAV17-201ENST00000390445 CABP4P57796 275 aa11.35□□□□□ -0.59
TRAV17-201ENST00000390445 AMOTQ4VCS5 1084 aa11.35□□□□□ -0.59
TRAV17-201ENST00000390445 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
TRAV17-201ENST00000390445 TRIM66O15016 1216 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
TRAV17-201ENST00000390445 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAV17-201ENST00000390445 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 CACNA1SQ13698 1873 aa11.34□□□□□ -0.59
TRAV17-201ENST00000390445 MRC1P22897 1456 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 PTCD1O75127 700 aaKnown RBP11.33□□□□□ -0.6
TRAV17-201ENST00000390445 HMGB2P26583 209 aaKnown RBP11.33□□□□□ -0.6
TRAV17-201ENST00000390445 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 VPS9D1Q9Y2B5 631 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 CD2APQ9Y5K6 639 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 SBF1O95248 1867 aa11.33□□□□□ -0.6
TRAV17-201ENST00000390445 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
TRAV17-201ENST00000390445 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
TRAV17-201ENST00000390445 KCPQ6ZWJ8 1503 aa11.31□□□□□ -0.6
TRAV17-201ENST00000390445 SMAPO00193 183 aa11.31□□□□□ -0.6
TRAV17-201ENST00000390445 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
TRAV17-201ENST00000390445 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
TRAV17-201ENST00000390445 RTCBQ9Y3I0 505 aaKnown RBP11.31□□□□□ -0.6
TRAV17-201ENST00000390445 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
TRAV17-201ENST00000390445 DIAPH1O60610 1272 aaKnown RBP11.3□□□□□ -0.6
TRAV17-201ENST00000390445 MMP10P09238 476 aa11.3□□□□□ -0.6
TRAV17-201ENST00000390445 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
TRAV17-201ENST00000390445 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
TRAV17-201ENST00000390445 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
TRAV17-201ENST00000390445 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
TRAV17-201ENST00000390445 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
TRAV17-201ENST00000390445 RNMTO43148 476 aaKnown RBP11.29□□□□□ -0.6
TRAV17-201ENST00000390445 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
TRAV17-201ENST00000390445 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 TATDN2Q93075 761 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 SLC52A2Q9HAB3 445 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
TRAV17-201ENST00000390445 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 TK2O00142 265 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 GRIN3BO60391 1043 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 GYS1P13807 737 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
TRAV17-201ENST00000390445 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
TRAV17-201ENST00000390445 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
TRAV17-201ENST00000390445 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
TRAV17-201ENST00000390445 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
TRAV17-201ENST00000390445 OATP04181 439 aa11.27□□□□□ -0.61
TRAV17-201ENST00000390445 RFC4P35249 363 aa11.27□□□□□ -0.61
TRAV17-201ENST00000390445 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
TRAV17-201ENST00000390445 PDE4DQ08499 809 aa11.27□□□□□ -0.61
TRAV17-201ENST00000390445 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
TRAV17-201ENST00000390445 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
TRAV17-201ENST00000390445 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
TRAV17-201ENST00000390445 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
TRAV17-201ENST00000390445 AMHR2Q16671 573 aa11.26□□□□□ -0.61
TRAV17-201ENST00000390445 INTS5Q6P9B9 1019 aaKnown RBP11.26□□□□□ -0.61
TRAV17-201ENST00000390445 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
TRAV17-201ENST00000390445 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
TRAV17-201ENST00000390445 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
TRAV17-201ENST00000390445 NLGN1Q8N2Q7 840 aa11.25□□□□□ -0.61
TRAV17-201ENST00000390445 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
TRAV17-201ENST00000390445 COL11A2P13942 1736 aaPredicted RBP11.24□□□□□ -0.61
TRAV17-201ENST00000390445 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 HRO43593 1189 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 C1QTNF8P60827 252 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 DDR1Q08345 913 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
TRAV17-201ENST00000390445 ADCY9O60503 1353 aa11.24□□□□□ -0.61
TRAV17-201ENST00000390445 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 GIGYF1O75420 1035 aaPredicted RBP11.23□□□□□ -0.61
TRAV17-201ENST00000390445 CYP19A1P11511 503 aaPredicted RBP11.23□□□□□ -0.61
TRAV17-201ENST00000390445 DPEP1P16444 411 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
TRAV17-201ENST00000390445 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
TRAV17-201ENST00000390445 CCDC87Q9NVE4 849 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms