RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 ARFGEF1Q9Y6D6 1849 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 RIPK4P57078 832 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 COL13A1Q5TAT6 717 aaPredicted RBP9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 TRAIPQ9BWF2 469 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 ZBTB1Q9Y2K1 713 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 RTCBQ9Y3I0 505 aaKnown RBP9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
TRAV12-3-201ENST00000390442 LAMB4A4D0S4 1761 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 DPEP1P16444 411 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 EIF4A1P60842 406 aaKnown RBP9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 C9orf131Q5VYM1 1079 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 PNNQ9H307 717 aaKnown RBP9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 KDM2BQ8NHM5 1336 aa9.25□□□□□ -0.93
TRAV12-3-201ENST00000390442 TNRC6CQ9HCJ0 1690 aaKnown RBP9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 DPYSL4O14531 572 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 APAF1O14727 1248 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 IRF6O14896 467 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 ANP32CO43423 234 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 ZNF853P0CG23 659 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 GYS1P13807 737 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 FSTL1Q12841 308 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 LRP10Q7Z4F1 713 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 JMYQ8N9B5 988 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 MAPK8IP3Q9UPT6 1336 aa9.24□□□□□ -0.93
TRAV12-3-201ENST00000390442 CHL1O00533 1208 aa9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 A1BGP04217 495 aa9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 RFC4P35249 363 aa9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 WDR43Q15061 677 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 PCMTD1Q96MG8 357 aaPredicted RBP9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 RNF181Q9P0P0 153 aa9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 SRP68Q9UHB9 627 aaKnown RBP9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
TRAV12-3-201ENST00000390442 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 BCORQ6W2J9 1755 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 TM4SF1P30408 202 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 TTC5Q8N0Z6 440 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 CLUAP1Q96AJ1 413 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 MRS2Q9HD23 443 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 BABAM1Q9NWV8 329 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 PIM2Q9P1W9 311 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
TRAV12-3-201ENST00000390442 IL6STP40189 918 aaPredicted RBP9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 PRELPP51888 382 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 DDR1Q08345 913 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 CCDC27Q2M243 656 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 KRT24Q2M2I5 525 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 SMC1BQ8NDV3 1235 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 RRAGCQ9HB90 399 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 NARFQ9UHQ1 456 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 COL15A1P39059 1388 aa9.21□□□□□ -0.94
TRAV12-3-201ENST00000390442 SBF1O95248 1867 aa9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 STARD3NLO95772 234 aa9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 NEFMP07197 916 aa9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 KCNA3P22001 575 aa9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 CANXP27824 592 aaKnown RBP9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 PIP4K2AP48426 406 aaPredicted RBP9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 MCM6Q14566 821 aa9.2□□□□□ -0.94
TRAV12-3-201ENST00000390442 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 HSPA1AP0DMV8 641 aaKnown RBP9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 HSPA1BP0DMV9 641 aaKnown RBP9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 WWC1Q8IX03 1113 aa9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 SERPINA10Q9UK55 444 aa9.19□□□□□ -0.94
TRAV12-3-201ENST00000390442 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 CHRNA5P30532 468 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 DSG2Q14126 1118 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 HIC1Q14526 733 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 NFIXQ14938 502 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 BMP2KQ9NSY1 1161 aaPredicted RBP9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
TRAV12-3-201ENST00000390442 ANKRD31Q8N7Z5 1873 aa9.17□□□□□ -0.94
TRAV12-3-201ENST00000390442 NUP98P52948 1817 aa9.17□□□□□ -0.94
TRAV12-3-201ENST00000390442 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
TRAV12-3-201ENST00000390442 ZNF521Q96K83 1311 aa9.17□□□□□ -0.94
TRAV12-3-201ENST00000390442 ZC3H4Q9UPT8 1303 aaKnown RBP9.17□□□□□ -0.94
TRAV12-3-201ENST00000390442 RASSF7Q02833 373 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms