RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 ECE1P42892 770 aa12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 LARGE2Q8N3Y3 721 aa12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 RBM17Q96I25 401 aaKnown RBP12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
TRAV13-2-201ENST00000390439 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
TRAV13-2-201ENST00000390439 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
TRAV13-2-201ENST00000390439 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
TRAV13-2-201ENST00000390439 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
TRAV13-2-201ENST00000390439 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 HSPA8P11142 646 aaKnown RBP12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 NIM1KQ8IY84 436 aa12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
TRAV13-2-201ENST00000390439 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
TRAV13-2-201ENST00000390439 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
TRAV13-2-201ENST00000390439 EPS15P42566 896 aa12.85□□□□□ -0.35
TRAV13-2-201ENST00000390439 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
TRAV13-2-201ENST00000390439 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
TRAV13-2-201ENST00000390439 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
TRAV13-2-201ENST00000390439 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 MYL6BP14649 208 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 GPTP24298 496 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 GRM1Q13255 1194 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
TRAV13-2-201ENST00000390439 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 MAP2K2P36507 400 aa12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 SCNN1DP51172 638 aa12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 SUSD4Q5VX71 490 aa12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 ADARB2Q9NS39 739 aaKnown RBP12.83□□□□□ -0.36
TRAV13-2-201ENST00000390439 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 CA12O43570 354 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 CYP4F22Q6NT55 531 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 ZNF34Q8IZ26 560 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
TRAV13-2-201ENST00000390439 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 CCDC85CA6NKD9 419 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 BBOX1O75936 387 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 CST9Q5W186 159 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 GPRC5DQ9NZD1 345 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 ZNRF3Q9ULT6 936 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
TRAV13-2-201ENST00000390439 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 TRAF5O00463 557 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 NTSR2O95665 410 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 TNIP1Q15025 636 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 AOC3Q16853 763 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
TRAV13-2-201ENST00000390439 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 CELF2O95319 508 aaKnown RBP12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 MLLT1Q03111 559 aaPredicted RBP12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 CXCL9Q07325 125 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 HSP90AB3PQ58FF7 597 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 SLC10A5Q5PT55 438 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 DPP8Q6V1X1 898 aaPredicted RBP12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
TRAV13-2-201ENST00000390439 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 MPNDQ8N594 471 aa12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
TRAV13-2-201ENST00000390439 H7C1D1 291 aa12.77□□□□□ -0.37
TRAV13-2-201ENST00000390439 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
TRAV13-2-201ENST00000390439 GMPSP49915 693 aaPredicted RBP12.77□□□□□ -0.37
TRAV13-2-201ENST00000390439 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
TRAV13-2-201ENST00000390439 AOC2O75106 756 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 KIAA2012Q0VF49 1180 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
TRAV13-2-201ENST00000390439 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms