RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
UBE3C-202ENST00000389103 ANKRD36CQ5JPF3 1778 aa18.31■□□□□ 0.52
UBE3C-202ENST00000389103 TOMM70O94826 608 aa18.31■□□□□ 0.52
UBE3C-202ENST00000389103 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
UBE3C-202ENST00000389103 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
UBE3C-202ENST00000389103 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
UBE3C-202ENST00000389103 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
UBE3C-202ENST00000389103 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
UBE3C-202ENST00000389103 HSP90AB3PQ58FF7 597 aa18.3■□□□□ 0.52
UBE3C-202ENST00000389103 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
UBE3C-202ENST00000389103 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
UBE3C-202ENST00000389103 PLBD2Q8NHP8 589 aa18.29■□□□□ 0.52
UBE3C-202ENST00000389103 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
UBE3C-202ENST00000389103 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
UBE3C-202ENST00000389103 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
UBE3C-202ENST00000389103 SLC51AQ86UW1 340 aa18.28■□□□□ 0.52
UBE3C-202ENST00000389103 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
UBE3C-202ENST00000389103 HSPA6P17066 643 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 SLC10A5Q5PT55 438 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 WWC1Q8IX03 1113 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 SYNE4Q8N205 404 aa18.27■□□□□ 0.52
UBE3C-202ENST00000389103 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
UBE3C-202ENST00000389103 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.51
UBE3C-202ENST00000389103 SNED1Q8TER0 1413 aa18.27■□□□□ 0.51
UBE3C-202ENST00000389103 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.51
UBE3C-202ENST00000389103 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.51
UBE3C-202ENST00000389103 NLRP3Q96P20 1036 aa18.27■□□□□ 0.51
UBE3C-202ENST00000389103 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
UBE3C-202ENST00000389103 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
UBE3C-202ENST00000389103 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
UBE3C-202ENST00000389103 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
UBE3C-202ENST00000389103 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
UBE3C-202ENST00000389103 TRMT112Q9UI30 125 aaKnown RBP18.26■□□□□ 0.51
UBE3C-202ENST00000389103 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
UBE3C-202ENST00000389103 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
UBE3C-202ENST00000389103 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
UBE3C-202ENST00000389103 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
UBE3C-202ENST00000389103 POTECB2RU33 542 aa18.24■□□□□ 0.51
UBE3C-202ENST00000389103 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
UBE3C-202ENST00000389103 DPY19L2Q6NUT2 758 aa18.24■□□□□ 0.51
UBE3C-202ENST00000389103 ISCA1Q9BUE6 129 aa18.24■□□□□ 0.51
UBE3C-202ENST00000389103 SH3TC1Q8TE82 1336 aa18.24■□□□□ 0.51
UBE3C-202ENST00000389103 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
UBE3C-202ENST00000389103 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
UBE3C-202ENST00000389103 CEP350Q5VT06 3117 aa18.23■□□□□ 0.51
UBE3C-202ENST00000389103 LAMB2P55268 1798 aa18.23■□□□□ 0.51
UBE3C-202ENST00000389103 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
UBE3C-202ENST00000389103 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
UBE3C-202ENST00000389103 WDR90Q96KV7 1748 aa18.22■□□□□ 0.51
UBE3C-202ENST00000389103 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
UBE3C-202ENST00000389103 ABCC4O15439 1325 aa18.22■□□□□ 0.51
UBE3C-202ENST00000389103 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
UBE3C-202ENST00000389103 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
UBE3C-202ENST00000389103 CCDC30Q5VVM6 783 aa18.21■□□□□ 0.51
UBE3C-202ENST00000389103 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
UBE3C-202ENST00000389103 PSMD1Q99460 953 aa18.21■□□□□ 0.51
UBE3C-202ENST00000389103 IL16Q14005 1332 aa18.2■□□□□ 0.5
UBE3C-202ENST00000389103 ZNF541Q9H0D2 1346 aa18.2■□□□□ 0.5
UBE3C-202ENST00000389103 IARSP41252 1262 aaKnown RBP18.2■□□□□ 0.5
UBE3C-202ENST00000389103 CC2D2BQ6DHV5 1058 aa18.2■□□□□ 0.5
UBE3C-202ENST00000389103 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
UBE3C-202ENST00000389103 FAM89AQ96GI7 184 aa18.2■□□□□ 0.5
UBE3C-202ENST00000389103 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
UBE3C-202ENST00000389103 DDX60Q8IY21 1712 aaKnown RBP18.19■□□□□ 0.5
UBE3C-202ENST00000389103 COL4A5P29400 1685 aa18.19■□□□□ 0.5
UBE3C-202ENST00000389103 FSTL1Q12841 308 aa18.19■□□□□ 0.5
UBE3C-202ENST00000389103 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
UBE3C-202ENST00000389103 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
UBE3C-202ENST00000389103 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
UBE3C-202ENST00000389103 MYD88Q99836 296 aa18.18■□□□□ 0.5
UBE3C-202ENST00000389103 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
UBE3C-202ENST00000389103 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
UBE3C-202ENST00000389103 APLP1P51693 650 aa18.17■□□□□ 0.5
UBE3C-202ENST00000389103 FZD9O00144 591 aa18.16■□□□□ 0.5
UBE3C-202ENST00000389103 GRIPAP1Q4V328 841 aa18.16■□□□□ 0.5
UBE3C-202ENST00000389103 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
UBE3C-202ENST00000389103 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
UBE3C-202ENST00000389103 GRAPQ13588 217 aa18.16■□□□□ 0.5
UBE3C-202ENST00000389103 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
UBE3C-202ENST00000389103 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
UBE3C-202ENST00000389103 IRS4O14654 1257 aaPredicted RBP18.15■□□□□ 0.5
UBE3C-202ENST00000389103 BBOX1O75936 387 aa18.15■□□□□ 0.5
UBE3C-202ENST00000389103 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
UBE3C-202ENST00000389103 L3MBTL3Q96JM7 780 aaPredicted RBP18.15■□□□□ 0.5
UBE3C-202ENST00000389103 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
UBE3C-202ENST00000389103 STK31Q9BXU1 1019 aa18.15■□□□□ 0.5
UBE3C-202ENST00000389103 MAP3K2Q9Y2U5 619 aa18.15■□□□□ 0.5
UBE3C-202ENST00000389103 TAF1P21675 1872 aa18.15■□□□□ 0.5
UBE3C-202ENST00000389103 COL4A1P02462 1669 aa18.14■□□□□ 0.5
UBE3C-202ENST00000389103 HTRA3P83110 453 aa18.14■□□□□ 0.49
UBE3C-202ENST00000389103 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
UBE3C-202ENST00000389103 G2E3Q7L622 706 aa18.14■□□□□ 0.49
UBE3C-202ENST00000389103 ZBTB38Q8NAP3 1195 aaPredicted RBP18.14■□□□□ 0.49
UBE3C-202ENST00000389103 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
UBE3C-202ENST00000389103 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
UBE3C-202ENST00000389103 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
UBE3C-202ENST00000389103 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
UBE3C-202ENST00000389103 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms