RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 SCN7AQ01118 1682 aa22.41■■□□□ 1.18
CD9-202ENST00000382515 KLRG2A4D1S0 409 aaPredicted RBP22.4■■□□□ 1.18
CD9-202ENST00000382515 NEURL1BA8MQ27 555 aa22.4■■□□□ 1.18
CD9-202ENST00000382515 IGKV5-2P06315 115 aa22.4■■□□□ 1.18
CD9-202ENST00000382515 BEND3Q5T5X7 828 aa22.4■■□□□ 1.18
CD9-202ENST00000382515 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
CD9-202ENST00000382515 BCAR3O75815 825 aa22.39■■□□□ 1.17
CD9-202ENST00000382515 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
CD9-202ENST00000382515 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.17
CD9-202ENST00000382515 C10orf71Q711Q0 1435 aa22.39■■□□□ 1.17
CD9-202ENST00000382515 FAM177BA6PVY3 158 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 F6X3S4 739 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 H0YIN7 160 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 MS4A1P11836 297 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
CD9-202ENST00000382515 GCKRQ14397 625 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 KLHL34Q8N239 644 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 NLRP3Q96P20 1036 aa22.38■■□□□ 1.17
CD9-202ENST00000382515 ERFEQ4G0M1 354 aa22.37■■□□□ 1.17
CD9-202ENST00000382515 SLC4A10Q6U841 1118 aa22.37■■□□□ 1.17
CD9-202ENST00000382515 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
CD9-202ENST00000382515 BCORQ6W2J9 1755 aa22.37■■□□□ 1.17
CD9-202ENST00000382515 H7C1W4 665 aa22.36■■□□□ 1.17
CD9-202ENST00000382515 RIC1Q4ADV7 1423 aa22.35■■□□□ 1.17
CD9-202ENST00000382515 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
CD9-202ENST00000382515 NUTM1Q86Y26 1132 aa22.35■■□□□ 1.17
CD9-202ENST00000382515 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
CD9-202ENST00000382515 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
CD9-202ENST00000382515 FAM89AQ96GI7 184 aa22.34■■□□□ 1.17
CD9-202ENST00000382515 PIM2Q9P1W9 311 aa22.34■■□□□ 1.17
CD9-202ENST00000382515 HDAC5Q9UQL6 1122 aa22.34■■□□□ 1.17
CD9-202ENST00000382515 CDHR2Q9BYE9 1310 aa22.33■■□□□ 1.17
CD9-202ENST00000382515 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
CD9-202ENST00000382515 IRS4O14654 1257 aaPredicted RBP22.33■■□□□ 1.17
CD9-202ENST00000382515 CRY2Q49AN0 593 aa22.33■■□□□ 1.17
CD9-202ENST00000382515 C2CD5Q86YS7 1000 aa22.33■■□□□ 1.17
CD9-202ENST00000382515 MASTLQ96GX5 879 aa22.33■■□□□ 1.17
CD9-202ENST00000382515 NUP98P52948 1817 aa22.33■■□□□ 1.16
CD9-202ENST00000382515 SRGNP10124 158 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 NPR1P16066 1061 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 DPEP1P16444 411 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 INTS3Q68E01 1043 aaKnown RBP22.32■■□□□ 1.16
CD9-202ENST00000382515 STYK1Q6J9G0 422 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 CNKSR1Q969H4 720 aa22.32■■□□□ 1.16
CD9-202ENST00000382515 C9orf78Q9NZ63 289 aaPredicted RBP22.32■■□□□ 1.16
CD9-202ENST00000382515 A0A0G2JLW4 131 aa22.31■■□□□ 1.16
CD9-202ENST00000382515 GRM8O00222 908 aa22.31■■□□□ 1.16
CD9-202ENST00000382515 PDE8AO60658 829 aa22.31■■□□□ 1.16
CD9-202ENST00000382515 TRIM27P14373 513 aa22.31■■□□□ 1.16
CD9-202ENST00000382515 KCNA3P22001 575 aa22.31■■□□□ 1.16
CD9-202ENST00000382515 SF3B3Q15393 1217 aaKnown RBP22.31■■□□□ 1.16
CD9-202ENST00000382515 HOXA10P31260 410 aaPredicted RBP22.3■■□□□ 1.16
CD9-202ENST00000382515 CCDC24Q8N4L8 307 aa22.3■■□□□ 1.16
CD9-202ENST00000382515 NLGN2Q8NFZ4 835 aa22.3■■□□□ 1.16
CD9-202ENST00000382515 PLA2G12BQ9BX93 195 aa22.3■■□□□ 1.16
CD9-202ENST00000382515 NRXN2Q9P2S2 1712 aa22.3■■□□□ 1.16
CD9-202ENST00000382515 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
CD9-202ENST00000382515 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
CD9-202ENST00000382515 UTYO14607 1347 aa22.29■■□□□ 1.16
CD9-202ENST00000382515 ABCC4O15439 1325 aa22.29■■□□□ 1.16
CD9-202ENST00000382515 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
CD9-202ENST00000382515 DALRD3Q5D0E6 543 aaKnown RBP22.28■■□□□ 1.16
CD9-202ENST00000382515 DZIP1LQ8IYY4 767 aaKnown RBP22.28■■□□□ 1.16
CD9-202ENST00000382515 RPGRQ92834 1020 aaKnown RBP22.28■■□□□ 1.16
CD9-202ENST00000382515 RBM17Q96I25 401 aaKnown RBP22.28■■□□□ 1.16
CD9-202ENST00000382515 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
CD9-202ENST00000382515 CHRNA5P30532 468 aa22.27■■□□□ 1.16
CD9-202ENST00000382515 CASP7P55210 303 aa22.27■■□□□ 1.16
CD9-202ENST00000382515 UBE3BQ7Z3V4 1068 aa22.27■■□□□ 1.16
CD9-202ENST00000382515 FTSJ3Q8IY81 847 aaKnown RBP22.27■■□□□ 1.16
CD9-202ENST00000382515 SYNE4Q8N205 404 aa22.27■■□□□ 1.16
CD9-202ENST00000382515 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.16
CD9-202ENST00000382515 ABCC12Q96J65 1359 aa22.26■■□□□ 1.15
CD9-202ENST00000382515 CCDC152Q4G0S7 254 aa22.26■■□□□ 1.15
CD9-202ENST00000382515 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
CD9-202ENST00000382515 USP44Q9H0E7 712 aa22.26■■□□□ 1.15
CD9-202ENST00000382515 GRIN3BO60391 1043 aa22.25■■□□□ 1.15
CD9-202ENST00000382515 BBOX1O75936 387 aa22.25■■□□□ 1.15
CD9-202ENST00000382515 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
CD9-202ENST00000382515 DDX46Q7L014 1031 aaKnown RBP22.25■■□□□ 1.15
CD9-202ENST00000382515 GNAI3P08754 354 aa22.24■■□□□ 1.15
CD9-202ENST00000382515 GRIPAP1Q4V328 841 aa22.24■■□□□ 1.15
CD9-202ENST00000382515 CHMP4BQ9H444 224 aaKnown RBP22.24■■□□□ 1.15
CD9-202ENST00000382515 ARFGEF2Q9Y6D5 1785 aa22.24■■□□□ 1.15
CD9-202ENST00000382515 CSF1RP07333 972 aa22.23■■□□□ 1.15
CD9-202ENST00000382515 GPR162Q16538 588 aa22.23■■□□□ 1.15
CD9-202ENST00000382515 SOGA3Q5TF21 947 aa22.23■■□□□ 1.15
CD9-202ENST00000382515 TMC4Q7Z404 712 aa22.23■■□□□ 1.15
CD9-202ENST00000382515 CTSWP56202 376 aa22.22■■□□□ 1.15
CD9-202ENST00000382515 CC2D2BQ6DHV5 1058 aa22.22■■□□□ 1.15
CD9-202ENST00000382515 TTLL11Q8NHH1 800 aa22.22■■□□□ 1.15
CD9-202ENST00000382515 CLUAP1Q96AJ1 413 aa22.22■■□□□ 1.15
CD9-202ENST00000382515 AFDNP55196 1824 aaKnown RBP22.22■■□□□ 1.15
CD9-202ENST00000382515 NBPF7P0C2Y1 421 aaPredicted RBP22.21■■□□□ 1.15
CD9-202ENST00000382515 TMX4Q9H1E5 349 aaPredicted RBP22.21■■□□□ 1.15
CD9-202ENST00000382515 BCS1LQ9Y276 419 aa22.21■■□□□ 1.15
CD9-202ENST00000382515 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
CD9-202ENST00000382515 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms