RNA–Protein interactions for RNA: ENST00000381106.4

FAM239B-201, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 1,099 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-201ENST00000381106 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
FAM239B-201ENST00000381106 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
FAM239B-201ENST00000381106 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
FAM239B-201ENST00000381106 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
FAM239B-201ENST00000381106 HSPA6P17066 643 aa23.27■■□□□ 1.32
FAM239B-201ENST00000381106 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
FAM239B-201ENST00000381106 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
FAM239B-201ENST00000381106 SLX4Q8IY92 1834 aa23.26■■□□□ 1.31
FAM239B-201ENST00000381106 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
FAM239B-201ENST00000381106 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
FAM239B-201ENST00000381106 TAOK3Q9H2K8 898 aa23.26■■□□□ 1.31
FAM239B-201ENST00000381106 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
FAM239B-201ENST00000381106 GLTPD2A6NH11 291 aa23.25■■□□□ 1.31
FAM239B-201ENST00000381106 AIMP1Q12904 312 aaKnown RBP23.25■■□□□ 1.31
FAM239B-201ENST00000381106 HSP90AB3PQ58FF7 597 aa23.25■■□□□ 1.31
FAM239B-201ENST00000381106 CACNA1SQ13698 1873 aa23.25■■□□□ 1.31
FAM239B-201ENST00000381106 CCDC30Q5VVM6 783 aa23.24■■□□□ 1.31
FAM239B-201ENST00000381106 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
FAM239B-201ENST00000381106 RNF123Q5XPI4 1314 aa23.24■■□□□ 1.31
FAM239B-201ENST00000381106 FER1L6Q2WGJ9 1857 aa23.24■■□□□ 1.31
FAM239B-201ENST00000381106 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
FAM239B-201ENST00000381106 TCIRG1Q13488 830 aa23.23■■□□□ 1.31
FAM239B-201ENST00000381106 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
FAM239B-201ENST00000381106 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
FAM239B-201ENST00000381106 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
FAM239B-201ENST00000381106 CEP350Q5VT06 3117 aa23.22■■□□□ 1.31
FAM239B-201ENST00000381106 HOXA10P31260 410 aaPredicted RBP23.22■■□□□ 1.31
FAM239B-201ENST00000381106 CCDC93Q567U6 631 aa23.22■■□□□ 1.31
FAM239B-201ENST00000381106 RBM46Q8TBY0 533 aaKnown RBP23.22■■□□□ 1.31
FAM239B-201ENST00000381106 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
FAM239B-201ENST00000381106 VEGFAP15692 232 aaPredicted RBP23.21■■□□□ 1.31
FAM239B-201ENST00000381106 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
FAM239B-201ENST00000381106 SLC10A5Q5PT55 438 aa23.21■■□□□ 1.31
FAM239B-201ENST00000381106 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
FAM239B-201ENST00000381106 NLRP10Q86W26 655 aa23.21■■□□□ 1.31
FAM239B-201ENST00000381106 ANKRD13DQ6ZTN6 518 aa23.2■■□□□ 1.3
FAM239B-201ENST00000381106 RTKN2Q8IZC4 609 aa23.2■■□□□ 1.3
FAM239B-201ENST00000381106 RPGRQ92834 1020 aaKnown RBP23.2■■□□□ 1.3
FAM239B-201ENST00000381106 MYH16Q9H6N6 1097 aa23.2■■□□□ 1.3
FAM239B-201ENST00000381106 LAMB2P55268 1798 aa23.19■■□□□ 1.3
FAM239B-201ENST00000381106 GOLGA2Q08379 1002 aa23.18■■□□□ 1.3
FAM239B-201ENST00000381106 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
FAM239B-201ENST00000381106 SPINK5Q9NQ38 1064 aaPredicted RBP23.18■■□□□ 1.3
FAM239B-201ENST00000381106 SNED1Q8TER0 1413 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 FKBP4Q02790 459 aaKnown RBP eCLIP23.17■■□□□ 1.3
FAM239B-201ENST00000381106 FSTL1Q12841 308 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 OLFM4Q6UX06 510 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 RBM17Q96I25 401 aaKnown RBP23.17■■□□□ 1.3
FAM239B-201ENST00000381106 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
FAM239B-201ENST00000381106 APLP1P51693 650 aa23.16■■□□□ 1.3
FAM239B-201ENST00000381106 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
FAM239B-201ENST00000381106 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
FAM239B-201ENST00000381106 DDX60Q8IY21 1712 aaKnown RBP23.16■■□□□ 1.3
FAM239B-201ENST00000381106 ISCA1Q9BUE6 129 aa23.15■■□□□ 1.3
FAM239B-201ENST00000381106 ZNF277Q9NRM2 450 aaPredicted RBP23.15■■□□□ 1.3
FAM239B-201ENST00000381106 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
FAM239B-201ENST00000381106 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
FAM239B-201ENST00000381106 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
FAM239B-201ENST00000381106 CC2D2BQ6DHV5 1058 aa23.14■■□□□ 1.29
FAM239B-201ENST00000381106 SYNE4Q8N205 404 aa23.14■■□□□ 1.29
FAM239B-201ENST00000381106 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.29
FAM239B-201ENST00000381106 VAMP4O75379 141 aa23.13■■□□□ 1.29
FAM239B-201ENST00000381106 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
FAM239B-201ENST00000381106 EXOSC9Q06265 439 aaKnown RBP23.13■■□□□ 1.29
FAM239B-201ENST00000381106 PSMD1Q99460 953 aa23.13■■□□□ 1.29
FAM239B-201ENST00000381106 CCDC88AQ3V6T2 1871 aa23.13■■□□□ 1.29
FAM239B-201ENST00000381106 POTECB2RU33 542 aa23.12■■□□□ 1.29
FAM239B-201ENST00000381106 GRIPAP1Q4V328 841 aa23.12■■□□□ 1.29
FAM239B-201ENST00000381106 RIC3Q7Z5B4 369 aa23.12■■□□□ 1.29
FAM239B-201ENST00000381106 SMC1BQ8NDV3 1235 aa23.12■■□□□ 1.29
FAM239B-201ENST00000381106 DDNO94850 711 aaPredicted RBP23.11■■□□□ 1.29
FAM239B-201ENST00000381106 HCLS1P14317 486 aaPredicted RBP23.11■■□□□ 1.29
FAM239B-201ENST00000381106 TCERG1O14776 1098 aaKnown RBP23.1■■□□□ 1.29
FAM239B-201ENST00000381106 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
FAM239B-201ENST00000381106 MIER1Q8N108 512 aa23.1■■□□□ 1.29
FAM239B-201ENST00000381106 E9PSI1 815 aa23.09■■□□□ 1.29
FAM239B-201ENST00000381106 ATP5J2-PTCD1G3V325 749 aa23.09■■□□□ 1.29
FAM239B-201ENST00000381106 IARSP41252 1262 aaKnown RBP23.09■■□□□ 1.29
FAM239B-201ENST00000381106 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
FAM239B-201ENST00000381106 ABCC4O15439 1325 aa23.08■■□□□ 1.29
FAM239B-201ENST00000381106 WDR90Q96KV7 1748 aa23.08■■□□□ 1.29
FAM239B-201ENST00000381106 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
FAM239B-201ENST00000381106 KSR2Q6VAB6 950 aa23.08■■□□□ 1.29
FAM239B-201ENST00000381106 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
FAM239B-201ENST00000381106 ZNF428Q96B54 188 aa23.07■■□□□ 1.28
FAM239B-201ENST00000381106 FAM89AQ96GI7 184 aa23.07■■□□□ 1.28
FAM239B-201ENST00000381106 BBOX1O75936 387 aa23.06■■□□□ 1.28
FAM239B-201ENST00000381106 FLIIQ13045 1269 aa23.06■■□□□ 1.28
FAM239B-201ENST00000381106 CCDC191Q8NCU4 936 aa23.06■■□□□ 1.28
FAM239B-201ENST00000381106 JDP2Q8WYK2 163 aa23.06■■□□□ 1.28
FAM239B-201ENST00000381106 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
FAM239B-201ENST00000381106 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
FAM239B-201ENST00000381106 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
FAM239B-201ENST00000381106 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
FAM239B-201ENST00000381106 G2E3Q7L622 706 aa23.05■■□□□ 1.28
FAM239B-201ENST00000381106 SLC51AQ86UW1 340 aa23.05■■□□□ 1.28
FAM239B-201ENST00000381106 DNAJC5GQ8N7S2 189 aa23.05■■□□□ 1.28
FAM239B-201ENST00000381106 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms