RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CNTROBQ8N137 903 aa21.12■□□□□ 0.97
VCX3A-201ENST00000381089 RBM17Q96I25 401 aaKnown RBP21.12■□□□□ 0.97
VCX3A-201ENST00000381089 NUP98P52948 1817 aa21.12■□□□□ 0.97
VCX3A-201ENST00000381089 KDM3BQ7LBC6 1761 aa21.12■□□□□ 0.97
VCX3A-201ENST00000381089 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
VCX3A-201ENST00000381089 MYL6BP14649 208 aa21.11■□□□□ 0.97
VCX3A-201ENST00000381089 CTCFP49711 727 aaPredicted RBP21.11■□□□□ 0.97
VCX3A-201ENST00000381089 VEGFBP49765 207 aa21.11■□□□□ 0.97
VCX3A-201ENST00000381089 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
VCX3A-201ENST00000381089 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
VCX3A-201ENST00000381089 DLG5Q8TDM6 1919 aa21.11■□□□□ 0.97
VCX3A-201ENST00000381089 ERBB4Q15303 1308 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 FOXN1O15353 648 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 GPTP24298 496 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
VCX3A-201ENST00000381089 TTLL7Q6ZT98 887 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 ZBTB3Q9H5J0 574 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 GJA3Q9Y6H8 435 aa21.1■□□□□ 0.97
VCX3A-201ENST00000381089 MAP1SQ66K74 1059 aaPredicted RBP21.09■□□□□ 0.97
VCX3A-201ENST00000381089 PPP1R42Q7Z4L9 355 aa21.09■□□□□ 0.97
VCX3A-201ENST00000381089 LARGE2Q8N3Y3 721 aa21.09■□□□□ 0.97
VCX3A-201ENST00000381089 ADAMTSL1Q8N6G6 1762 aa21.09■□□□□ 0.97
VCX3A-201ENST00000381089 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
VCX3A-201ENST00000381089 DEFB115Q30KQ5 88 aa21.08■□□□□ 0.97
VCX3A-201ENST00000381089 CRAMP1Q96RY5 1269 aa21.08■□□□□ 0.97
VCX3A-201ENST00000381089 UBN2Q6ZU65 1347 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 SNED1Q8TER0 1413 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 RASSF10A6NK89 507 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 PARP10Q53GL7 1025 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
VCX3A-201ENST00000381089 ABT1Q9ULW3 272 aaKnown RBP21.07■□□□□ 0.96
VCX3A-201ENST00000381089 GIGYF2Q6Y7W6 1299 aaKnown RBP21.06■□□□□ 0.96
VCX3A-201ENST00000381089 NIM1KQ8IY84 436 aa21.06■□□□□ 0.96
VCX3A-201ENST00000381089 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
VCX3A-201ENST00000381089 NLRP3Q96P20 1036 aa21.06■□□□□ 0.96
VCX3A-201ENST00000381089 THUMPD2Q9BTF0 503 aaKnown RBP21.05■□□□□ 0.96
VCX3A-201ENST00000381089 WBP1LQ9NX94 342 aa21.05■□□□□ 0.96
VCX3A-201ENST00000381089 TSPYL4Q9UJ04 414 aa21.05■□□□□ 0.96
VCX3A-201ENST00000381089 TCERG1O14776 1098 aaKnown RBP21.04■□□□□ 0.96
VCX3A-201ENST00000381089 NTSR2O95665 410 aa21.04■□□□□ 0.96
VCX3A-201ENST00000381089 MAP2K1Q02750 393 aaPredicted RBP21.04■□□□□ 0.96
VCX3A-201ENST00000381089 VPS33BQ9H267 617 aa21.04■□□□□ 0.96
VCX3A-201ENST00000381089 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
VCX3A-201ENST00000381089 PPIP5K2O43314 1243 aa21.03■□□□□ 0.96
VCX3A-201ENST00000381089 USP50Q70EL3 339 aaPredicted RBP21.03■□□□□ 0.96
VCX3A-201ENST00000381089 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
VCX3A-201ENST00000381089 WDR33Q9C0J8 1336 aaKnown RBP21.03■□□□□ 0.96
VCX3A-201ENST00000381089 SUPT20HQ8NEM7 779 aa21.02■□□□□ 0.96
VCX3A-201ENST00000381089 EIF2S2P20042 333 aaKnown RBP21.01■□□□□ 0.95
VCX3A-201ENST00000381089 SCNN1DP51172 638 aa21.01■□□□□ 0.95
VCX3A-201ENST00000381089 PAXIP1Q6ZW49 1069 aaPredicted RBP21.01■□□□□ 0.95
VCX3A-201ENST00000381089 ATP6V0A2Q9Y487 856 aa21.01■□□□□ 0.95
VCX3A-201ENST00000381089 COL4A5P29400 1685 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 EPS15P42566 896 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 ECE1P42892 770 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 LBX1P52954 281 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 LMOD3Q0VAK6 560 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 HSP90AB3PQ58FF7 597 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 BEGAINQ9BUH8 593 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 BABAM1Q9NWV8 329 aa21■□□□□ 0.95
VCX3A-201ENST00000381089 SLC10A5Q5PT55 438 aa20.99■□□□□ 0.95
VCX3A-201ENST00000381089 RIPK4P57078 832 aa20.98■□□□□ 0.95
VCX3A-201ENST00000381089 AOC3Q16853 763 aa20.98■□□□□ 0.95
VCX3A-201ENST00000381089 ADARB2Q9NS39 739 aaKnown RBP20.98■□□□□ 0.95
VCX3A-201ENST00000381089 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
VCX3A-201ENST00000381089 BBOX1O75936 387 aa20.97■□□□□ 0.95
VCX3A-201ENST00000381089 C3orf67Q6ZVT6 689 aa20.97■□□□□ 0.95
VCX3A-201ENST00000381089 ZNRF3Q9ULT6 936 aa20.97■□□□□ 0.95
VCX3A-201ENST00000381089 ABCC4O15439 1325 aa20.97■□□□□ 0.95
VCX3A-201ENST00000381089 DPP8Q6V1X1 898 aaPredicted RBP20.96■□□□□ 0.95
VCX3A-201ENST00000381089 GPRC5DQ9NZD1 345 aa20.96■□□□□ 0.95
VCX3A-201ENST00000381089 HSPA8P11142 646 aaKnown RBP20.95■□□□□ 0.94
VCX3A-201ENST00000381089 PDIA6Q15084 440 aa20.95■□□□□ 0.94
VCX3A-201ENST00000381089 DDX46Q7L014 1031 aaKnown RBP20.95■□□□□ 0.94
VCX3A-201ENST00000381089 SP8Q8IXZ3 490 aa20.95■□□□□ 0.94
VCX3A-201ENST00000381089 CAPNS2Q96L46 248 aa20.95■□□□□ 0.94
VCX3A-201ENST00000381089 RTFDC1Q9BY42 306 aaPredicted RBP20.95■□□□□ 0.94
VCX3A-201ENST00000381089 TRPM7Q96QT4 1865 aa20.94■□□□□ 0.94
VCX3A-201ENST00000381089 GRM1Q13255 1194 aa20.94■□□□□ 0.94
VCX3A-201ENST00000381089 LRP10Q7Z4F1 713 aa20.94■□□□□ 0.94
VCX3A-201ENST00000381089 MPNDQ8N594 471 aa20.94■□□□□ 0.94
VCX3A-201ENST00000381089 CDHR2Q9BYE9 1310 aa20.94■□□□□ 0.94
VCX3A-201ENST00000381089 CXCL9Q07325 125 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
VCX3A-201ENST00000381089 TNIP1Q15025 636 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 PROSER3Q2NL68 480 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 CIAPIN1Q6FI81 312 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 GPR101Q96P66 508 aaPredicted RBP20.93■□□□□ 0.94
VCX3A-201ENST00000381089 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
VCX3A-201ENST00000381089 TRMT112Q9UI30 125 aaKnown RBP20.93■□□□□ 0.94
VCX3A-201ENST00000381089 ANKRD36CQ5JPF3 1778 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 TRAF5O00463 557 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 ANXA1P04083 346 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 TMC4Q7Z404 712 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 XAGE3Q8WTP9 111 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 TLL2Q9Y6L7 1015 aa20.92■□□□□ 0.94
VCX3A-201ENST00000381089 SH3TC1Q8TE82 1336 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms