RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
CDX2-201ENST00000381020 EAF2Q96CJ1 260 aaPredicted RBP14.87□□□□□ -0.03
CDX2-201ENST00000381020 TTC41PQ6P2S7 1318 aa14.87□□□□□ -0.03
CDX2-201ENST00000381020 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
CDX2-201ENST00000381020 ZSCAN31Q96LW9 406 aaPredicted RBP14.87□□□□□ -0.03
CDX2-201ENST00000381020 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
CDX2-201ENST00000381020 IBTKQ9P2D0 1353 aaPredicted RBP14.86□□□□□ -0.03
CDX2-201ENST00000381020 AK2P54819 239 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 CHAMP1Q96JM3 812 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDX2-201ENST00000381020 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 CCT2P78371 535 aaKnown RBP14.86□□□□□ -0.03
CDX2-201ENST00000381020 HSP90AB3PQ58FF7 597 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 AKAP2Q9Y2D5 859 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 CRB1P82279 1406 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 CYP27B1O15528 508 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 ATP2B1P20020 1258 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 GJB2P29033 226 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 ANAPC15P60006 121 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 GUCY1B3Q02153 619 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 KRT32Q14532 448 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 PLBD2Q8NHP8 589 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 MTMR7Q9Y216 660 aa14.86□□□□□ -0.03
CDX2-201ENST00000381020 SGSM2O43147 1006 aa14.85□□□□□ -0.03
CDX2-201ENST00000381020 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
CDX2-201ENST00000381020 TFIP11Q9UBB9 837 aaKnown RBP14.85□□□□□ -0.03
CDX2-201ENST00000381020 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
CDX2-201ENST00000381020 PKP1Q13835 747 aa14.85□□□□□ -0.03
CDX2-201ENST00000381020 CHMP4CQ96CF2 233 aa14.85□□□□□ -0.03
CDX2-201ENST00000381020 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
CDX2-201ENST00000381020 KRT85P78386 507 aa14.84□□□□□ -0.03
CDX2-201ENST00000381020 DDB1Q16531 1140 aa14.84□□□□□ -0.03
CDX2-201ENST00000381020 IQSEC3Q9UPP2 1182 aaPredicted RBP14.84□□□□□ -0.03
CDX2-201ENST00000381020 STX6O43752 255 aa14.84□□□□□ -0.03
CDX2-201ENST00000381020 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
CDX2-201ENST00000381020 BECN2A8MW95 431 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 G3V3G9 751 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 TRIM29Q14134 588 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 BRINP3Q76B58 766 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 LRP2BPQ9P2M1 347 aa14.83□□□□□ -0.03
CDX2-201ENST00000381020 XRCC6P12956 609 aaKnown RBP eCLIP14.83□□□□□ -0.04
CDX2-201ENST00000381020 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
CDX2-201ENST00000381020 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
CDX2-201ENST00000381020 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
CDX2-201ENST00000381020 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
CDX2-201ENST00000381020 BRF1Q92994 677 aa14.83□□□□□ -0.04
CDX2-201ENST00000381020 KDRP35968 1356 aa14.83□□□□□ -0.04
CDX2-201ENST00000381020 IGHMBP2P38935 993 aaKnown RBP14.82□□□□□ -0.04
CDX2-201ENST00000381020 CREB3L3Q68CJ9 461 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 CHST3Q7LGC8 479 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 TSPY26PQ9H489 355 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 TLR7Q9NYK1 1049 aaKnown RBP14.82□□□□□ -0.04
CDX2-201ENST00000381020 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 ERICH2A1L162 156 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 AIDAQ96BJ3 306 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 ANTXR1Q9H6X2 564 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 SNX14Q9Y5W7 946 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 CCDC73Q6ZRK6 1079 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 SH2B1Q9NRF2 756 aaPredicted RBP14.82□□□□□ -0.04
CDX2-201ENST00000381020 ASAP1Q9ULH1 1129 aa14.82□□□□□ -0.04
CDX2-201ENST00000381020 GOLGA6L19H0YKK7 550 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 CAMK4Q16566 473 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 IMMTQ16891 758 aaKnown RBP14.81□□□□□ -0.04
CDX2-201ENST00000381020 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
CDX2-201ENST00000381020 TULP1O00294 542 aaPredicted RBP14.81□□□□□ -0.04
CDX2-201ENST00000381020 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 SDF4Q9BRK5 362 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 RAI14Q9P0K7 980 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 SASS6Q6UVJ0 657 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 SPATA32Q96LK8 384 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 PAG1Q9NWQ8 432 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 CTNNA3Q9UI47 895 aa14.81□□□□□ -0.04
CDX2-201ENST00000381020 DIP2AQ14689 1571 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 PTH1RQ03431 593 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 A0A1B0GUL7 405 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 MCMDC2Q4G0Z9 681 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 CCDC82Q8N4S0 544 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 OSBPL3Q9H4L5 887 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 TDO2P48775 406 aa14.8□□□□□ -0.04
CDX2-201ENST00000381020 GOLGA6L6A8MZA4 724 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 IRS4O14654 1257 aaPredicted RBP14.79□□□□□ -0.04
CDX2-201ENST00000381020 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 ME1P48163 572 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
CDX2-201ENST00000381020 CREBRFQ8IUR6 639 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 RAD50Q92878 1312 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 HCLS1P14317 486 aaPredicted RBP14.79□□□□□ -0.04
CDX2-201ENST00000381020 TMX4Q9H1E5 349 aaPredicted RBP14.79□□□□□ -0.04
CDX2-201ENST00000381020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDX2-201ENST00000381020 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
CDX2-201ENST00000381020 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 EYA2O00167 538 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 IGKV5-2P06315 115 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms