RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
CCDC171-201ENST00000380701 LIMCH1Q9UPQ0 1083 aa8.29□□□□□ -1.08
CCDC171-201ENST00000380701 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 HOXB7P09629 217 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 RARSP54136 660 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 BRDTQ58F21 947 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 RBM17Q96I25 401 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 DDX19AQ9NUU7 478 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 SEPT11Q9NVA2 429 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 LRRFIP2Q9Y608 721 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 ANAPC15P60006 121 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 MAP3K2Q9Y2U5 619 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 STK24Q9Y6E0 443 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 EIF2AK4Q9P2K8 1649 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 KCNA6P17658 529 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 IFI16Q16666 785 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 PNMA2Q9UL42 364 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
CCDC171-201ENST00000380701 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 ARHGAP29Q52LW3 1261 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 KSR2Q6VAB6 950 aa8.28□□□□□ -1.08
CCDC171-201ENST00000380701 BIVM-ERCC5R4GMW8 1640 aa8.27□□□□□ -1.08
CCDC171-201ENST00000380701 CALML3P27482 149 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC174Q6PII3 467 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 KIAA1328Q86T90 577 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 EXOC6BQ9Y2D4 811 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 RTL9Q8NET4 1388 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 GOLGA6L9A6NEM1 432 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 MCM5P33992 734 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 LINS1Q8NG48 757 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 SSH1Q8WYL5 1049 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 BOLA2Q9H3K6 86 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 PABPN1LA6NDY0 278 aaKnown RBP8.27□□□□□ -1.09
CCDC171-201ENST00000380701 SPAG1Q07617 926 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
CCDC171-201ENST00000380701 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 TMEM67Q5HYA8 995 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 ZNF771Q7L3S4 317 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-201ENST00000380701 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 PIBF1Q8WXW3 757 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 ZSCAN16Q9H4T2 348 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-201ENST00000380701 WDR97A6NE52 1622 aa8.27□□□□□ -1.09
CCDC171-201ENST00000380701 DKC1O60832 514 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 UBA7P41226 1012 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 PRPF40BQ6NWY9 871 aaKnown RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 ATP10BO94823 1461 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC171Q6TFL3 1326 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 YEATS4O95619 227 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 CEBPZQ03701 1054 aaKnown RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 MAP9Q49MG5 647 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 PDCL2Q8N4E4 241 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC85AQ96PX6 553 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 TFCP2L1Q9NZI6 479 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 ATP10AO60312 1499 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 PIK3C2GO75747 1445 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 STX6O43752 255 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 GPTP24298 496 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 PRPHP41219 470 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 BAG6P46379 1132 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 UBE3BQ7Z3V4 1068 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 MSANTD4Q8NCY6 345 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 TTC12Q9H892 705 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 NAA16Q6N069 864 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 GIGYF2Q6Y7W6 1299 aaKnown RBP8.26□□□□□ -1.09
CCDC171-201ENST00000380701 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 SIRT1Q96EB6 747 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
CCDC171-201ENST00000380701 RAD50Q92878 1312 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 C6orf50Q9HD87 102 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 NPATQ14207 1427 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 PPP1R2P41236 205 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 LEKR1Q6ZMV7 388 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 DDX11Q96FC9 970 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 NAA15Q9BXJ9 866 aaKnown RBP8.25□□□□□ -1.09
CCDC171-201ENST00000380701 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 H0YHG0 523 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 BMP2KLQ5H9B9 411 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
CCDC171-201ENST00000380701 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 KCNG1Q9UIX4 513 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 NIP7Q9Y221 180 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC171-201ENST00000380701 STAMBPO95630 424 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 USHBP1Q8N6Y0 703 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 TTC41PQ6P2S7 1318 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC66A2RUB6 948 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 WTAPQ15007 396 aa8.25□□□□□ -1.09
CCDC171-201ENST00000380701 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
CCDC171-201ENST00000380701 NEO1Q92859 1461 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 POTEB2H3BUK9 544 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 SFPQP23246 707 aaKnown RBP eCLIP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms