RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 LRRC37A3O60309 1634 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 MARF1Q9Y4F3 1742 aaKnown RBP8.85□□□□□ -0.99
CDKL5-201ENST00000379989 TPM4P67936 248 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 TCHHQ07283 1943 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 DLG5Q8TDM6 1919 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 RPAINQ86UA6 219 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 RBM28Q9NW13 759 aaKnown RBP8.85□□□□□ -0.99
CDKL5-201ENST00000379989 SLIT3O75094 1523 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 CLCN6P51797 869 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 LRMPQ12912 555 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 HDAC1Q13547 482 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-201ENST00000379989 IQUBQ8NA54 791 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 CEP89Q96ST8 783 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 FAM208AQ9UK61 1670 aaKnown RBP8.84□□□□□ -0.99
CDKL5-201ENST00000379989 CAMTA1Q9Y6Y1 1673 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 GADD45BO75293 160 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-201ENST00000379989 CEP135Q66GS9 1140 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 REXO1L1PQ8IX06 675 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 JMYQ8N9B5 988 aa8.84□□□□□ -0.99
CDKL5-201ENST00000379989 INHBEP58166 350 aa8.84□□□□□ -1
CDKL5-201ENST00000379989 GPS2Q13227 327 aa8.84□□□□□ -1
CDKL5-201ENST00000379989 MVPQ14764 893 aaKnown RBP8.84□□□□□ -1
CDKL5-201ENST00000379989 RABEP1Q15276 862 aa8.84□□□□□ -1
CDKL5-201ENST00000379989 BMP2KLQ5H9B9 411 aa8.84□□□□□ -1
CDKL5-201ENST00000379989 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -1
CDKL5-201ENST00000379989 PEAK1Q9H792 1746 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 MMS22LQ6ZRQ5 1243 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 NME9Q86XW9 330 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 UBXN6Q9BZV1 441 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 NCAPD2Q15021 1401 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 KLHL33A6NCF5 533 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 TTC36A6NLP5 189 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 NPHP1O15259 732 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 PRKAR2BP31323 418 aa8.83□□□□□ -1
CDKL5-201ENST00000379989 ZCCHC17Q9NP64 241 aaKnown RBP8.83□□□□□ -1
CDKL5-201ENST00000379989 CCDC196A0A1B0GTZ2 297 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
CDKL5-201ENST00000379989 TRDNQ13061 729 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.82□□□□□ -13e-7■■■■□ 24.6
CDKL5-201ENST00000379989 DZIP1LQ8IYY4 767 aaKnown RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 ZBTB12Q9Y330 459 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 IGSF1Q8N6C5 1336 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 TPD52L1Q16890 204 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 PPM1EQ8WY54 764 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 USP26Q9BXU7 913 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 API5Q9BZZ5 524 aaKnown RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 ZKSCAN8Q15776 578 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 ATF7IPQ6VMQ6 1270 aa8.82□□□□□ -1
CDKL5-201ENST00000379989 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
CDKL5-201ENST00000379989 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 SSR1P43307 286 aaKnown RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 RNF20Q5VTR2 975 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 MED1Q15648 1581 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 KIF3CO14782 793 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 SLU7O95391 586 aaKnown RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 CEBPAP49715 358 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 ERCC6LQ2NKX8 1250 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 CCDC183Q5T5S1 534 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 NBPF6Q5VWK0 638 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 CCDC186Q7Z3E2 898 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 NBPF5PQ86XG9 351 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 NBPF4Q96M43 638 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 LNPKQ9C0E8 428 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 ZSCAN16Q9H4T2 348 aaPredicted RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 NFAT5O94916 1531 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 CPP00450 1065 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 SCP2P22307 547 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 OAS2P29728 719 aaKnown RBP8.81□□□□□ -1
CDKL5-201ENST00000379989 ACTN2P35609 894 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 NUCB1Q02818 461 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 GDPD2Q9HCC8 539 aa8.81□□□□□ -1
CDKL5-201ENST00000379989 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
CDKL5-201ENST00000379989 FUCA2Q9BTY2 467 aa8.8□□□□□ -1
CDKL5-201ENST00000379989 BRD1O95696 1058 aa8.8□□□□□ -1
CDKL5-201ENST00000379989 PHF8Q9UPP1 1060 aa8.8□□□□□ -1
CDKL5-201ENST00000379989 CORO7P57737 925 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 EIF4A2Q14240 407 aaKnown RBP8.79□□□□□ -1
CDKL5-201ENST00000379989 ZSCAN25Q6NSZ9 544 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 OTUD6BQ8N6M0 293 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 TBC1D22AQ8WUA7 517 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 ITFG2Q969R8 447 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 PSD3Q9NYI0 1048 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 NRBP1Q9UHY1 535 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 USP27XA6NNY8 438 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 LMAN1P49257 510 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
CDKL5-201ENST00000379989 FOXR1Q6PIV2 292 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 NYAP1Q6ZVC0 841 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 HOXB7P09629 217 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 MX1P20591 662 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms