RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TRDNQ13061 729 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 VPS53Q5VIR6 699 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 CDC37L1Q7L3B6 337 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 DBF4Q9UBU7 674 aaPredicted RBP13.35□□□□□ -0.27
SMAD9-202ENST00000379826 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
SMAD9-202ENST00000379826 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 RAD50Q92878 1312 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 KRT32Q14532 448 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 FLT4P35916 1363 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 TNRQ92752 1358 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 ZC3H6P61129 1189 aaKnown RBP13.35□□□□□ -0.27
SMAD9-202ENST00000379826 PTH1RQ03431 593 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 TTC39AQ5SRH9 613 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
SMAD9-202ENST00000379826 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
SMAD9-202ENST00000379826 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 WDHD1O75717 1129 aaPredicted RBP13.34□□□□□ -0.27
SMAD9-202ENST00000379826 RXRBP28702 533 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 Q6ZUG5 572 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
SMAD9-202ENST00000379826 FSIP1Q8NA03 581 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 NEK1Q96PY6 1258 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 MED14O60244 1454 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMAD9-202ENST00000379826 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
SMAD9-202ENST00000379826 RGS12O14924 1447 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 BRF1Q92994 677 aa13.34□□□□□ -0.27
SMAD9-202ENST00000379826 TERF1P54274 439 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 DDX46Q7L014 1031 aaKnown RBP13.33□□□□□ -0.28
SMAD9-202ENST00000379826 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
SMAD9-202ENST00000379826 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
SMAD9-202ENST00000379826 TEX35Q5T0J7 233 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
SMAD9-202ENST00000379826 HOXC9P31274 260 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
SMAD9-202ENST00000379826 GPR162Q16538 588 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 STX1AQ16623 288 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
SMAD9-202ENST00000379826 ME3Q16798 604 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
SMAD9-202ENST00000379826 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 TMC6Q7Z403 805 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 PYCARDQ9ULZ3 195 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 METP08581 1390 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 BICC1Q9H694 974 aaKnown RBP13.32□□□□□ -0.28
SMAD9-202ENST00000379826 ANO10Q9NW15 660 aa13.32□□□□□ -0.28
SMAD9-202ENST00000379826 GOLIM4O00461 696 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 SLC27A2O14975 620 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 BEGAINQ9BUH8 593 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 LARGE1O95461 756 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
SMAD9-202ENST00000379826 ATP7BP35670 1465 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 LRRFIP1Q32MZ4 808 aaKnown RBP13.31□□□□□ -0.28
SMAD9-202ENST00000379826 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
SMAD9-202ENST00000379826 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
SMAD9-202ENST00000379826 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
SMAD9-202ENST00000379826 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
SMAD9-202ENST00000379826 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
SMAD9-202ENST00000379826 SKILP12757 684 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 AOPEPQ8N6M6 819 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
SMAD9-202ENST00000379826 OSBPL3Q9H4L5 887 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 KCNQ3O43525 872 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 HAND2P61296 217 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 LIG1P18858 919 aa13.3□□□□□ -0.28
SMAD9-202ENST00000379826 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-202ENST00000379826 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-202ENST00000379826 AOX1Q06278 1338 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-202ENST00000379826 RRP12Q5JTH9 1297 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms