RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ESYT1Q9BSJ8 1104 aa12.79□□□□□ -0.36
POLR2J3-201ENST00000379340 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-201ENST00000379340 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 ST18O60284 1047 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 CHMLP26374 656 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 CLASRPQ8N2M8 674 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 GPATCH3Q96I76 525 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
POLR2J3-201ENST00000379340 MYL6BP14649 208 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 ANAPC15P60006 121 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 GSE1Q14687 1217 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 CNTROBQ8N137 903 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 USP16Q9Y5T5 823 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 CHD4Q14839 1912 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.36
POLR2J3-201ENST00000379340 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 GCKRQ14397 625 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 RILPL2Q969X0 211 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
POLR2J3-201ENST00000379340 PTMSP20962 102 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 DDB1Q16531 1140 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 MYD88Q99836 296 aa12.76□□□□□ -0.37
POLR2J3-201ENST00000379340 MCM2P49736 904 aa12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 BICC1Q9H694 974 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-201ENST00000379340 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
POLR2J3-201ENST00000379340 CD2BP2O95400 341 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 IFIT2P09913 472 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 MCM4P33991 863 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-201ENST00000379340 ARXQ96QS3 562 aa12.72□□□□□ -0.37
POLR2J3-201ENST00000379340 ANO2Q9NQ90 1003 aa12.72□□□□□ -0.37
POLR2J3-201ENST00000379340 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
POLR2J3-201ENST00000379340 HIP1O00291 1037 aa12.71□□□□□ -0.37
POLR2J3-201ENST00000379340 SGSM2O43147 1006 aa12.71□□□□□ -0.37
POLR2J3-201ENST00000379340 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
POLR2J3-201ENST00000379340 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
POLR2J3-201ENST00000379340 BCL9O00512 1426 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 TJP1Q07157 1748 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 SASH1O94885 1247 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 AACSQ86V21 672 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 EVI5LQ96CN4 794 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 RAD50Q92878 1312 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 ITGB4P16144 1822 aa12.7□□□□□ -0.38
POLR2J3-201ENST00000379340 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 HSPA4P34932 840 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 NUCB2P80303 420 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 ZNF827Q17R98 1081 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 A0A087WZG4 1122 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 H7C1W4 665 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 CASP7P55210 303 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 GPR162Q16538 588 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-201ENST00000379340 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-201ENST00000379340 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
POLR2J3-201ENST00000379340 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 RFX7Q2KHR2 1363 aa12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 NEK4P51957 841 aa12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
POLR2J3-201ENST00000379340 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms