RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NUTM1Q86Y26 1132 aa23.86■■□□□ 1.41
SSU72-203ENST00000378725 NOB1Q9ULX3 412 aaKnown RBP23.86■■□□□ 1.41
SSU72-203ENST00000378725 SRCAPQ6ZRS2 3230 aa23.86■■□□□ 1.41
SSU72-203ENST00000378725 ANKRD36CQ5JPF3 1778 aa23.86■■□□□ 1.41
SSU72-203ENST00000378725 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
SSU72-203ENST00000378725 BCAR3O75815 825 aa23.85■■□□□ 1.41
SSU72-203ENST00000378725 PDE6BP35913 854 aa23.85■■□□□ 1.41
SSU72-203ENST00000378725 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
SSU72-203ENST00000378725 TRMT112Q9UI30 125 aaKnown RBP23.85■■□□□ 1.41
SSU72-203ENST00000378725 NEURL1BA8MQ27 555 aa23.84■■□□□ 1.41
SSU72-203ENST00000378725 KCNA3P22001 575 aa23.84■■□□□ 1.41
SSU72-203ENST00000378725 BEND3Q5T5X7 828 aa23.84■■□□□ 1.41
SSU72-203ENST00000378725 ARHGAP45Q92619 1136 aa23.84■■□□□ 1.41
SSU72-203ENST00000378725 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
SSU72-203ENST00000378725 PDZRN3Q9UPQ7 1066 aa23.84■■□□□ 1.41
SSU72-203ENST00000378725 PXDNLA1KZ92 1463 aa23.83■■□□□ 1.41
SSU72-203ENST00000378725 A0A0G2JLW4 131 aa23.83■■□□□ 1.41
SSU72-203ENST00000378725 DPEP1P16444 411 aa23.83■■□□□ 1.41
SSU72-203ENST00000378725 CWF19L2Q2TBE0 894 aaKnown RBP23.83■■□□□ 1.41
SSU72-203ENST00000378725 ZBTB38Q8NAP3 1195 aaPredicted RBP23.83■■□□□ 1.41
SSU72-203ENST00000378725 SH3TC1Q8TE82 1336 aa23.83■■□□□ 1.4
SSU72-203ENST00000378725 SYNE4Q8N205 404 aa23.82■■□□□ 1.4
SSU72-203ENST00000378725 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
SSU72-203ENST00000378725 KIF16BQ96L93 1317 aa23.82■■□□□ 1.4
SSU72-203ENST00000378725 ABCC12Q96J65 1359 aa23.81■■□□□ 1.4
SSU72-203ENST00000378725 PCCAP05165 728 aaPredicted RBP23.81■■□□□ 1.4
SSU72-203ENST00000378725 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
SSU72-203ENST00000378725 H0YIN7 160 aa23.8■■□□□ 1.4
SSU72-203ENST00000378725 CHRNA5P30532 468 aa23.8■■□□□ 1.4
SSU72-203ENST00000378725 GCKRQ14397 625 aa23.8■■□□□ 1.4
SSU72-203ENST00000378725 C2CD5Q86YS7 1000 aa23.8■■□□□ 1.4
SSU72-203ENST00000378725 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
SSU72-203ENST00000378725 KIAA1551Q9HCM1 1747 aa23.79■■□□□ 1.4
SSU72-203ENST00000378725 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
SSU72-203ENST00000378725 ALDH1L1O75891 902 aa23.79■■□□□ 1.4
SSU72-203ENST00000378725 SLC4A10Q6U841 1118 aa23.79■■□□□ 1.4
SSU72-203ENST00000378725 H7C1W4 665 aa23.78■■□□□ 1.4
SSU72-203ENST00000378725 SRGNP10124 158 aa23.78■■□□□ 1.4
SSU72-203ENST00000378725 CRY2Q49AN0 593 aa23.78■■□□□ 1.4
SSU72-203ENST00000378725 ANKRD31Q8N7Z5 1873 aa23.78■■□□□ 1.4
SSU72-203ENST00000378725 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
SSU72-203ENST00000378725 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
SSU72-203ENST00000378725 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
SSU72-203ENST00000378725 PIM2Q9P1W9 311 aa23.77■■□□□ 1.4
SSU72-203ENST00000378725 RCAN3Q9UKA8 241 aa23.77■■□□□ 1.4
SSU72-203ENST00000378725 IRS4O14654 1257 aaPredicted RBP23.76■■□□□ 1.39
SSU72-203ENST00000378725 CDHR2Q9BYE9 1310 aa23.76■■□□□ 1.39
SSU72-203ENST00000378725 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
SSU72-203ENST00000378725 STYK1Q6J9G0 422 aa23.75■■□□□ 1.39
SSU72-203ENST00000378725 ATF7IPQ6VMQ6 1270 aa23.75■■□□□ 1.39
SSU72-203ENST00000378725 C3orf67Q6ZVT6 689 aa23.75■■□□□ 1.39
SSU72-203ENST00000378725 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
SSU72-203ENST00000378725 MASTLQ96GX5 879 aa23.75■■□□□ 1.39
SSU72-203ENST00000378725 TRIM27P14373 513 aa23.74■■□□□ 1.39
SSU72-203ENST00000378725 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
SSU72-203ENST00000378725 NPR1P16066 1061 aa23.74■■□□□ 1.39
SSU72-203ENST00000378725 CASP7P55210 303 aa23.74■■□□□ 1.39
SSU72-203ENST00000378725 JARID2Q92833 1246 aaPredicted RBP23.74■■□□□ 1.39
SSU72-203ENST00000378725 N4BP2Q86UW6 1770 aaPredicted RBP23.73■■□□□ 1.39
SSU72-203ENST00000378725 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
SSU72-203ENST00000378725 ZKSCAN2Q63HK3 967 aa23.73■■□□□ 1.39
SSU72-203ENST00000378725 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
SSU72-203ENST00000378725 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
SSU72-203ENST00000378725 TTLL6Q8N841 843 aa23.72■■□□□ 1.39
SSU72-203ENST00000378725 ZNF622Q969S3 477 aaKnown RBP eCLIP23.72■■□□□ 1.39
SSU72-203ENST00000378725 ABCC4O15439 1325 aa23.72■■□□□ 1.39
SSU72-203ENST00000378725 TNRC6CQ9HCJ0 1690 aaKnown RBP23.71■■□□□ 1.39
SSU72-203ENST00000378725 GRM8O00222 908 aa23.71■■□□□ 1.39
SSU72-203ENST00000378725 PDE8AO60658 829 aa23.71■■□□□ 1.39
SSU72-203ENST00000378725 DALRD3Q5D0E6 543 aaKnown RBP23.71■■□□□ 1.39
SSU72-203ENST00000378725 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
SSU72-203ENST00000378725 CNKSR1Q969H4 720 aa23.71■■□□□ 1.39
SSU72-203ENST00000378725 UTYO14607 1347 aa23.7■■□□□ 1.38
SSU72-203ENST00000378725 INTS3Q68E01 1043 aaKnown RBP23.7■■□□□ 1.38
SSU72-203ENST00000378725 PLA2G12BQ9BX93 195 aa23.7■■□□□ 1.38
SSU72-203ENST00000378725 YBX3P16989 372 aaKnown RBP eCLIP23.69■■□□□ 1.384e-8■□□□□ 8.4
SSU72-203ENST00000378725 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
SSU72-203ENST00000378725 GPR162Q16538 588 aa23.69■■□□□ 1.38
SSU72-203ENST00000378725 RBM17Q96I25 401 aaKnown RBP23.69■■□□□ 1.38
SSU72-203ENST00000378725 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
SSU72-203ENST00000378725 C9orf78Q9NZ63 289 aaPredicted RBP23.69■■□□□ 1.38
SSU72-203ENST00000378725 TNNQ9UQP3 1299 aa23.69■■□□□ 1.38
SSU72-203ENST00000378725 COL11A2P13942 1736 aaPredicted RBP23.68■■□□□ 1.38
SSU72-203ENST00000378725 RPGRQ92834 1020 aaKnown RBP23.68■■□□□ 1.38
SSU72-203ENST00000378725 USP44Q9H0E7 712 aa23.68■■□□□ 1.38
SSU72-203ENST00000378725 WWC3Q9ULE0 1092 aa23.68■■□□□ 1.38
SSU72-203ENST00000378725 BCS1LQ9Y276 419 aa23.68■■□□□ 1.38
SSU72-203ENST00000378725 DLEC1Q9Y238 1755 aa23.68■■□□□ 1.38
SSU72-203ENST00000378725 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
SSU72-203ENST00000378725 DCAF8L1A6NGE4 600 aa23.66■■□□□ 1.38
SSU72-203ENST00000378725 NBPF7P0C2Y1 421 aaPredicted RBP23.66■■□□□ 1.38
SSU72-203ENST00000378725 BRCA1P38398 1863 aaKnown RBP23.66■■□□□ 1.38
SSU72-203ENST00000378725 CTSWP56202 376 aa23.65■■□□□ 1.38
SSU72-203ENST00000378725 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
SSU72-203ENST00000378725 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
SSU72-203ENST00000378725 TTLL11Q8NHH1 800 aa23.65■■□□□ 1.38
SSU72-203ENST00000378725 CLUAP1Q96AJ1 413 aa23.65■■□□□ 1.38
SSU72-203ENST00000378725 GRIN3BO60391 1043 aa23.64■■□□□ 1.37
SSU72-203ENST00000378725 CSF1RP07333 972 aa23.64■■□□□ 1.37
SSU72-203ENST00000378725 FOXO4P98177 505 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms