RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
RER1-203ENST00000378513 F13A1P00488 732 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.45■□□□□ 0.54
RER1-203ENST00000378513 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 CYP46A1Q9Y6A2 500 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 LRRC2Q9BYS8 371 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
RER1-203ENST00000378513 PDIA6Q15084 440 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
RER1-203ENST00000378513 SEC62Q99442 399 aaKnown RBP18.44■□□□□ 0.54
RER1-203ENST00000378513 NOL7Q9UMY1 257 aaKnown RBP18.44■□□□□ 0.54
RER1-203ENST00000378513 CAMK4Q16566 473 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
RER1-203ENST00000378513 PXDNLA1KZ92 1463 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 GPATCH3Q96I76 525 aa18.44■□□□□ 0.54
RER1-203ENST00000378513 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
RER1-203ENST00000378513 OFD1O75665 1012 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 AMOTQ4VCS5 1084 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 RUFY2Q8WXA3 655 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 TTC41PQ6P2S7 1318 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 TTC12Q9H892 705 aaPredicted RBP18.43■□□□□ 0.54
RER1-203ENST00000378513 MTMR6Q9Y217 621 aa18.43■□□□□ 0.54
RER1-203ENST00000378513 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.43■□□□□ 0.54
RER1-203ENST00000378513 HOXB7P09629 217 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
RER1-203ENST00000378513 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 SYAP1Q96A49 352 aaPredicted RBP18.42■□□□□ 0.54
RER1-203ENST00000378513 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 NFAT5O94916 1531 aa18.42■□□□□ 0.54
RER1-203ENST00000378513 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
RER1-203ENST00000378513 NECTIN1Q15223 517 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
RER1-203ENST00000378513 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 SLC27A2O14975 620 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 TSC1Q92574 1164 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
RER1-203ENST00000378513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
RER1-203ENST00000378513 MTX1Q13505 466 aa18.4■□□□□ 0.54
RER1-203ENST00000378513 LARP1BQ659C4 914 aaKnown RBP18.4■□□□□ 0.54
RER1-203ENST00000378513 TAOK2Q9UL54 1235 aa18.4■□□□□ 0.54
RER1-203ENST00000378513 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
RER1-203ENST00000378513 TFCP2Q12800 502 aa18.4■□□□□ 0.54
RER1-203ENST00000378513 ZSWIM6Q9HCJ5 1215 aa18.4■□□□□ 0.54
RER1-203ENST00000378513 NEURL1BA8MQ27 555 aa18.39■□□□□ 0.54
RER1-203ENST00000378513 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.54
RER1-203ENST00000378513 DDX46Q7L014 1031 aaKnown RBP18.39■□□□□ 0.54
RER1-203ENST00000378513 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
RER1-203ENST00000378513 ADCY5O95622 1261 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 CEBPZQ03701 1054 aaKnown RBP18.38■□□□□ 0.53
RER1-203ENST00000378513 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 GCKRQ14397 625 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
RER1-203ENST00000378513 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 JAK2O60674 1132 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 ERC1Q8IUD2 1116 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
RER1-203ENST00000378513 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
RER1-203ENST00000378513 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
RER1-203ENST00000378513 ERBB3P21860 1342 aa18.37■□□□□ 0.53
RER1-203ENST00000378513 UBE2HP62256 183 aa18.37■□□□□ 0.53
RER1-203ENST00000378513 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
RER1-203ENST00000378513 CCDC39Q9UFE4 941 aa18.37■□□□□ 0.53
RER1-203ENST00000378513 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
RER1-203ENST00000378513 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
RER1-203ENST00000378513 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 BLOC1S2Q6QNY1 142 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 AP5Z1O43299 807 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 LARP1Q6PKG0 1096 aaKnown RBP18.36■□□□□ 0.53
RER1-203ENST00000378513 ANKRD13DQ6ZTN6 518 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 LIG1P18858 919 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 NEUROD6Q96NK8 337 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
RER1-203ENST00000378513 A0A087WZG4 1122 aa18.35■□□□□ 0.53
RER1-203ENST00000378513 ZHX1Q9UKY1 873 aaPredicted RBP18.35■□□□□ 0.53
RER1-203ENST00000378513 PHF14O94880 888 aa18.35■□□□□ 0.53
RER1-203ENST00000378513 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
RER1-203ENST00000378513 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
RER1-203ENST00000378513 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
RER1-203ENST00000378513 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
RER1-203ENST00000378513 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
RER1-203ENST00000378513 COL15A1P39059 1388 aa18.34■□□□□ 0.53
RER1-203ENST00000378513 CYP27B1O15528 508 aa18.33■□□□□ 0.52
RER1-203ENST00000378513 PHKG2P15735 406 aa18.33■□□□□ 0.52
RER1-203ENST00000378513 TIMM10P62072 90 aa18.33■□□□□ 0.52
RER1-203ENST00000378513 TOB2Q14106 344 aaPredicted RBP18.33■□□□□ 0.52
RER1-203ENST00000378513 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.52
RER1-203ENST00000378513 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms