RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 STAC3Q96MF2 364 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 CTR9Q6PD62 1173 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 NME9Q86XW9 330 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 CCDC160A6NGH7 325 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 PRKG1Q13976 671 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 PLIN2Q99541 437 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 YEATS4O95619 227 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 TCHPQ9BT92 498 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 CETN1Q12798 172 aa18.75■□□□□ 0.59
RGP1-201ENST00000378078 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 LDHAL6AQ6ZMR3 332 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 TBCAO75347 108 aaKnown RBP18.74■□□□□ 0.59
RGP1-201ENST00000378078 HARSP12081 509 aaKnown RBP18.74■□□□□ 0.59
RGP1-201ENST00000378078 PAFAH1B1P43034 410 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
RGP1-201ENST00000378078 EXOC1Q9NV70 894 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 RBM27Q9P2N5 1060 aaKnown RBP18.74■□□□□ 0.59
RGP1-201ENST00000378078 KRT13P13646 458 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 CFAP58Q5T655 872 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 MPHOSPH6Q99547 160 aaKnown RBP18.74■□□□□ 0.59
RGP1-201ENST00000378078 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 GJB2P29033 226 aa18.74■□□□□ 0.59
RGP1-201ENST00000378078 PPP2R5CQ13362 524 aa18.73■□□□□ 0.59
RGP1-201ENST00000378078 STX6O43752 255 aa18.73■□□□□ 0.59
RGP1-201ENST00000378078 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
RGP1-201ENST00000378078 CCDC175P0C221 793 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 CCDC196A0A1B0GTZ2 297 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 METAP2P50579 478 aaKnown RBP eCLIP18.72■□□□□ 0.59
RGP1-201ENST00000378078 ACTN2P35609 894 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 PDE4BQ07343 736 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 TAOK3Q9H2K8 898 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 TBC1D5Q92609 795 aa18.72■□□□□ 0.59
RGP1-201ENST00000378078 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
RGP1-201ENST00000378078 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
RGP1-201ENST00000378078 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
RGP1-201ENST00000378078 MTERF4Q7Z6M4 381 aaKnown RBP18.71■□□□□ 0.59
RGP1-201ENST00000378078 ALS2CR12Q96Q35 445 aa18.71■□□□□ 0.59
RGP1-201ENST00000378078 RASA3Q14644 834 aa18.71■□□□□ 0.59
RGP1-201ENST00000378078 BAG3O95817 575 aa18.71■□□□□ 0.59
RGP1-201ENST00000378078 CCDC65Q8IXS2 484 aa18.71■□□□□ 0.59
RGP1-201ENST00000378078 FBLN1P23142 703 aa18.7■□□□□ 0.58
RGP1-201ENST00000378078 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
RGP1-201ENST00000378078 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
RGP1-201ENST00000378078 MAP9Q49MG5 647 aa18.7■□□□□ 0.58
RGP1-201ENST00000378078 MRRFQ96E11 262 aaKnown RBP18.7■□□□□ 0.58
RGP1-201ENST00000378078 IRX5P78411 483 aaPredicted RBP18.7■□□□□ 0.58
RGP1-201ENST00000378078 SAP30BPQ9UHR5 308 aaKnown RBP18.7■□□□□ 0.58
RGP1-201ENST00000378078 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
RGP1-201ENST00000378078 CHST3Q7LGC8 479 aa18.69■□□□□ 0.58
RGP1-201ENST00000378078 ANKRD30BQ9BXX2 1392 aa18.69■□□□□ 0.58
RGP1-201ENST00000378078 CYP7A1P22680 504 aa18.69■□□□□ 0.58
RGP1-201ENST00000378078 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
RGP1-201ENST00000378078 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
RGP1-201ENST00000378078 GTF2F1P35269 517 aaKnown RBP eCLIP18.68■□□□□ 0.58
RGP1-201ENST00000378078 UBE3BQ7Z3V4 1068 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 USP25Q9UHP3 1055 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 ERCC5P28715 1186 aaPredicted RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 STAT6P42226 847 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 AMPD3Q01432 767 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 NECAB1Q8N987 351 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 CLSTN2Q9H4D0 955 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 RRAGBQ5VZM2 374 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 GINS2Q9Y248 185 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 UBA7P41226 1012 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 CWC25Q9NXE8 425 aaPredicted RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 GLRX3O76003 335 aaKnown RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 SSFA2P28290 1259 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 FLIIQ13045 1269 aa18.68■□□□□ 0.58
RGP1-201ENST00000378078 CDC5LQ99459 802 aaKnown RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 PHAXQ9H814 394 aaKnown RBP18.68■□□□□ 0.58
RGP1-201ENST00000378078 PPP2R5DQ14738 602 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 SORBS3O60504 671 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 HAUS7Q99871 368 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 TPD52P55327 224 aaPredicted RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 CCDC183Q5T5S1 534 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
RGP1-201ENST00000378078 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
RGP1-201ENST00000378078 KIF5BP33176 963 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 HDAC9Q9UKV0 1011 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 PLCB3Q01970 1234 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 SELENOSQ9BQE4 189 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms